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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 4
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 91.46 94.3
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 94.47 92.61
CDY24881 Canola extracellular 65.33 67.71
AT1G62262.1 Thale cress plasma membrane 86.93 47.4
CDY12936 Canola plasma membrane 82.91 43.31
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 82.41 42.38
CDY08628 Canola golgi, peroxisome, plasma membrane 80.9 41.6
CDY03280 Canola plasma membrane 81.41 41.33
GSMUA_Achr6P07610_001 Banana golgi, mitochondrion, plasma membrane, plastid 57.79 34.02
KRH51762 Soybean mitochondrion 52.26 33.12
KRH56158 Soybean golgi, peroxisome, plasma membrane 57.79 31.08
GSMUA_Achr10P... Banana endoplasmic reticulum 55.28 30.47
Solyc07g051950.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 53.77 29.97
Solyc03g031590.2.1 Tomato cytosol, peroxisome, plasma membrane 55.78 29.76
KRH61084 Soybean golgi, peroxisome, plasma membrane 57.29 29.46
VIT_12s0059g00860.t01 Wine grape peroxisome, plasma membrane, plastid 56.78 29.27
Solyc04g080990.1.1 Tomato cytosol, golgi, peroxisome 58.29 29.15
GSMUA_Achr1P25300_001 Banana cytosol, endoplasmic reticulum, plasma membrane 55.78 29.13
Zm00001d039241_P001 Maize golgi, plasma membrane, plastid 56.28 28.79
KRH51125 Soybean plasma membrane 53.77 28.53
KRH02037 Soybean plasma membrane 52.76 28.15
TraesCS3B01G199200.1 Wheat plasma membrane 54.77 27.88
GSMUA_Achr7P17640_001 Banana golgi, plasma membrane, plastid 53.77 27.86
GSMUA_Achr9P21990_001 Banana plasma membrane 52.76 27.78
TraesCS3D01G174800.1 Wheat plasma membrane 54.27 27.76
HORVU3Hr1G033800.1 Barley plastid 54.77 27.59
TraesCS3A01G167000.1 Wheat plasma membrane 54.27 26.8
EER99979 Sorghum plastid 55.28 26.19
Os05t0269200-00 Rice cytosol, golgi, plasma membrane 51.76 25.81
VIT_18s0001g13440.t01 Wine grape golgi, plasma membrane, vacuole 39.2 24.92
KRH25357 Soybean plasma membrane 36.68 24.41
Os01t0247700-01 Rice extracellular, plasma membrane 37.69 21.61
CDX84361 Canola plasma membrane 37.69 19.23
HORVU5Hr1G066120.1 Barley extracellular, plasma membrane 21.61 15.75
HORVU2Hr1G118150.1 Barley peroxisome 23.62 15.72
CDY29871 Canola plastid 38.19 15.29
CDX92855 Canola plastid 38.19 15.26
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 37.69 14.94
HORVU3Hr1G098700.1 Barley extracellular, plasma membrane 23.62 14.24
CDX98059 Canola cytosol, peroxisome, plastid 36.18 12.97
CDY30084 Canola plasma membrane 36.68 12.46
CDX87147 Canola cytosol, nucleus, plasma membrane 36.68 11.72
CDY19015 Canola plastid 37.19 11.62
CDX89215 Canola plastid 37.19 11.62
CDY14262 Canola plastid 37.69 11.57
CDX80404 Canola cytosol 36.68 11.48
CDY44267 Canola cytosol 34.67 11.24
CDY46973 Canola cytosol 34.67 11.16
CDX88065 Canola cytosol 36.68 9.8
CDY19523 Canola cytosol, extracellular, plasma membrane 3.52 5.51
CDY12934 Canola cytosol, extracellular, plasma membrane 3.52 5.11
CDX97407 Canola cytosol 1.01 1.35
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 0.0 0.0
CDY08625 Canola plasma membrane 0.0 0.0
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:A0A078G3H3UniProt:A0A078G3H3EnsemblPlants:CDY19522ProteinID:CDY19522
ProteinID:CDY19522.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0006810
GO:GO:0006873GO:GO:0008150GO:GO:0008308GO:GO:0009987GO:GO:0015698GO:GO:0016020
GO:GO:0016021GO:GO:0019725GO:GO:0055085GO:GO:0098656EnsemblPlantsGene:GSBRNA2T00009148001InterPro:IPR038665
PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF7InterPro:SLAC/SLAHTMHMM:TMhelixUniParc:UPI0004EE8F41
InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg:::
Description
BnaC09g13810DBnaC09g13810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3H3]
Coordinates
chrLK032097:-:278230..279219
Molecular Weight (calculated)
22209.5 Da
IEP (calculated)
10.144
GRAVY (calculated)
0.606
Length
199 amino acids
Sequence
(BLAST)
001: MANPASQVSV IANLVAARGA AEMGWRECAL CLFSLGMVHY LVIFVTLYQR LPGGNNFPTT LRPVFFLFFA APATGSLAWN YISGTFDTLA KMLFFLSLFI
101: FVSLVCRPTL LKKSIKRFNV AWWAYSFPIT FLALDSVQYA EEVKDHVASA LMFIFCSISV LIFLGVMLLT AANSKRLLRR DPVLWSATGK PNTSDRNKI
Best Arabidopsis Sequence Match ( AT1G62262.1 )
(BLAST)
001: MEIPSQEIHI MIDNTISRRK ERKTNLADAE PIVLMSVLSS LHAGYFRISL SLCSQALLWK IMVHLHSELP SMAYYLLWYL ALATQVSLCF LYAFKCIFLF
101: DMVKEEFSHY IGVNYLYAPS ISCLLLLQSA PMIEPHSVLY QTLFWIFAVP VLTLDTKLYG QWFTTEKRFL SIMANPASQV SVIANLVAAR GAAEMGWKEC
201: ALCLFSLGMV HYLVIFVTLY QRLPGGNNFP TTLRPVFFLF FAAPATASLA WNSICGNFDT IAKMLFFLSL FIFISLVCRP NLLKKSIKRF NVAWWAYSFP
301: ITFLALNSVQ YAQEVKDHVA SVLMFIFSSM SVLIFISVML LTAANSKRLL RRDHVLWSST GPKDK
Arabidopsis Description
SLAH4S-type anion channel SLAH4 [Source:UniProtKB/Swiss-Prot;Acc:A8MRV9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.