Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 90.15 94.82
CDY19522 Canola endoplasmic reticulum 92.61 94.47
CDY24881 Canola extracellular 63.55 67.19
AT1G62262.1 Thale cress plasma membrane 85.22 47.4
CDY12936 Canola plasma membrane 81.28 43.31
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 80.79 42.38
CDY08628 Canola golgi, peroxisome, plasma membrane 79.8 41.86
CDY03280 Canola plasma membrane 80.3 41.58
GSMUA_Achr6P07610_001 Banana golgi, mitochondrion, plasma membrane, plastid 56.65 34.02
KRH51762 Soybean mitochondrion 51.23 33.12
KRH56158 Soybean golgi, peroxisome, plasma membrane 56.65 31.08
GSMUA_Achr10P... Banana endoplasmic reticulum 54.68 30.75
Solyc07g051950.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 52.71 29.97
Solyc03g031590.2.1 Tomato cytosol, peroxisome, plasma membrane 54.68 29.76
KRH61084 Soybean golgi, peroxisome, plasma membrane 56.16 29.46
VIT_12s0059g00860.t01 Wine grape peroxisome, plasma membrane, plastid 55.66 29.27
Solyc04g080990.1.1 Tomato cytosol, golgi, peroxisome 57.14 29.15
GSMUA_Achr1P25300_001 Banana cytosol, endoplasmic reticulum, plasma membrane 54.68 29.13
Zm00001d039241_P001 Maize golgi, plasma membrane, plastid 54.68 28.53
KRH51125 Soybean plasma membrane 52.71 28.53
KRH02037 Soybean plasma membrane 51.72 28.15
GSMUA_Achr7P17640_001 Banana golgi, plasma membrane, plastid 53.2 28.12
TraesCS3B01G199200.1 Wheat plasma membrane 53.69 27.88
GSMUA_Achr9P21990_001 Banana plasma membrane 51.72 27.78
TraesCS3D01G174800.1 Wheat plasma membrane 53.2 27.76
HORVU3Hr1G033800.1 Barley plastid 53.69 27.59
TraesCS3A01G167000.1 Wheat plasma membrane 53.2 26.8
EER99979 Sorghum plastid 53.69 25.95
Os05t0269200-00 Rice cytosol, golgi, plasma membrane 50.25 25.56
VIT_18s0001g13440.t01 Wine grape golgi, plasma membrane, vacuole 38.42 24.92
KRH25357 Soybean plasma membrane 35.96 24.41
Os01t0247700-01 Rice extracellular, plasma membrane 36.95 21.61
CDX84361 Canola plasma membrane 36.95 19.23
HORVU5Hr1G066120.1 Barley extracellular, plasma membrane 21.18 15.75
HORVU2Hr1G118150.1 Barley peroxisome 23.15 15.72
CDY29871 Canola plastid 37.44 15.29
CDX92855 Canola plastid 37.44 15.26
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 36.95 14.94
HORVU3Hr1G098700.1 Barley extracellular, plasma membrane 23.15 14.24
CDX98059 Canola cytosol, peroxisome, plastid 35.47 12.97
CDY30084 Canola plasma membrane 35.96 12.46
CDX87147 Canola cytosol, nucleus, plasma membrane 35.96 11.72
CDY19015 Canola plastid 36.45 11.62
CDX89215 Canola plastid 36.45 11.62
CDY14262 Canola plastid 36.95 11.57
CDX80404 Canola cytosol 35.96 11.48
CDY44267 Canola cytosol 33.5 11.07
CDY46973 Canola cytosol 33.5 11.0
CDX88065 Canola cytosol 35.96 9.8
CDY19523 Canola cytosol, extracellular, plasma membrane 3.45 5.51
CDY12934 Canola cytosol, extracellular, plasma membrane 3.45 5.11
CDX97407 Canola cytosol 0.99 1.35
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 0.0 0.0
CDY08625 Canola plasma membrane 0.0 0.0
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:A0A078FL70UniProt:A0A078FL70EnsemblPlants:CDY12933ProteinID:CDY12933
ProteinID:CDY12933.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0006810
GO:GO:0006873GO:GO:0008150GO:GO:0008308GO:GO:0009987GO:GO:0015698GO:GO:0016020
GO:GO:0016021GO:GO:0019725GO:GO:0055085GO:GO:0098656EnsemblPlantsGene:GSBRNA2T00070605001InterPro:IPR038665
PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF7InterPro:SLAC/SLAHTMHMM:TMhelixUniParc:UPI0004EE2DC7
InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg:::
Description
BnaA09g13410DBnaA09g13410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FL70]
Coordinates
chrLK032028:-:508958..510002
Molecular Weight (calculated)
22578.9 Da
IEP (calculated)
10.364
GRAVY (calculated)
0.597
Length
203 amino acids
Sequence
(BLAST)
001: MANPASQVSV IANLVAARGA AEMGWRECAL CLFSLGMVHY LVIFVTLYQR LPGGNNFPTT LRPVFFLFFA APATGSLAWN HISGTFDTVA KMLFFLSLFI
101: FVSLVCRPTL LKKSIKRFNV AWWAYSFPIT FLALDSVQYA EEVKHHVASA LMFIFCSISV LIFLGVMLLT AANSKRLLRR DPVLWSATGP KTDKKSLSAN
201: ANW
Best Arabidopsis Sequence Match ( AT1G62262.1 )
(BLAST)
001: MEIPSQEIHI MIDNTISRRK ERKTNLADAE PIVLMSVLSS LHAGYFRISL SLCSQALLWK IMVHLHSELP SMAYYLLWYL ALATQVSLCF LYAFKCIFLF
101: DMVKEEFSHY IGVNYLYAPS ISCLLLLQSA PMIEPHSVLY QTLFWIFAVP VLTLDTKLYG QWFTTEKRFL SIMANPASQV SVIANLVAAR GAAEMGWKEC
201: ALCLFSLGMV HYLVIFVTLY QRLPGGNNFP TTLRPVFFLF FAAPATASLA WNSICGNFDT IAKMLFFLSL FIFISLVCRP NLLKKSIKRF NVAWWAYSFP
301: ITFLALNSVQ YAQEVKDHVA SVLMFIFSSM SVLIFISVML LTAANSKRLL RRDHVLWSST GPKDK
Arabidopsis Description
SLAH4S-type anion channel SLAH4 [Source:UniProtKB/Swiss-Prot;Acc:A8MRV9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.