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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026471.1-P Field mustard cytosol, plastid 87.64 98.03
CDX80404 Canola cytosol 89.57 87.74
AT5G24030.1 Thale cress cytosol, endoplasmic reticulum, nucleus 87.64 85.98
CDY44267 Canola cytosol 77.85 78.99
CDY46973 Canola cytosol 78.17 78.8
CDX88065 Canola cytosol 89.41 74.77
HORVU5Hr1G055480.1 Barley golgi 30.98 72.56
Zm00001d010430_P001 Maize plasma membrane 35.63 67.89
CDX84361 Canola plasma membrane 40.77 65.13
KRH38307 Soybean golgi, plasma membrane, plastid 40.93 61.59
GSMUA_Achr5P06840_001 Banana cytosol, endoplasmic reticulum, peroxisome 39.65 61.44
TraesCS1B01G388600.1 Wheat plasma membrane 34.99 58.45
KRH08776 Soybean cytosol, nucleus, plasma membrane 55.54 57.96
KRH38311 Soybean cytosol, nucleus, plasma membrane 55.54 57.96
PGSC0003DMT400074359 Potato plasma membrane 55.54 57.86
PGSC0003DMT400021864 Potato cytosol, peroxisome, plastid 51.52 57.84
GSMUA_Achr9P05400_001 Banana plastid 41.09 57.4
TraesCSU01G204200.1 Wheat plasma membrane 24.24 57.2
CDX92855 Canola plastid 45.43 56.83
CDY29871 Canola plastid 44.94 56.34
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 45.26 56.18
Solyc06g036440.1.1 Tomato cytosol, peroxisome, plasma membrane 55.54 56.08
Solyc03g007770.2.1 Tomato cytosol, nucleus, plasma membrane 51.69 55.23
VIT_16s0050g01860.t01 Wine grape cytosol, nucleus, plasma membrane 55.06 54.7
KRH08775 Soybean cytosol, nucleus, plasma membrane 50.88 54.28
Solyc09g014610.2.1 Tomato plasma membrane 51.36 53.87
PGSC0003DMT400051388 Potato cytosol, nucleus, plasma membrane 52.81 53.41
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 41.41 50.69
TraesCS1D01G126500.1 Wheat cytosol, peroxisome, plasma membrane 49.12 50.66
TraesCS3B01G178600.1 Wheat cytosol, peroxisome, plasma membrane 48.64 50.33
TraesCS1A01G423900.1 Wheat plasma membrane 40.61 50.2
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 48.15 50.17
TraesCS3D01G159600.1 Wheat cytosol, peroxisome, plasma membrane 47.99 49.59
Os05t0219900-01 Rice cytosol, peroxisome, plasma membrane, plastid 49.12 49.2
TraesCS3A01G151400.1 Wheat cytosol, peroxisome, plasma membrane 47.83 49.17
GSMUA_Achr7P14260_001 Banana cytosol 47.03 49.16
Os01t0385400-01 Rice cytosol, endoplasmic reticulum, plasma membrane 49.28 49.12
TraesCS1B01G147400.1 Wheat plasma membrane 49.44 48.5
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 48.64 48.25
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 41.73 48.15
TraesCS1B01G455100.1 Wheat plasma membrane 41.41 48.13
Zm00001d037816_P001 Maize plasma membrane 48.8 47.8
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 40.29 47.72
KXG22629 Sorghum cytosol, peroxisome, plasma membrane 39.49 47.67
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 40.61 47.56
TraesCS3B01G254700.1 Wheat cytosol, peroxisome, plasma membrane 47.03 47.33
TraesCS1D01G432800.1 Wheat plasma membrane 43.98 47.24
TraesCS1A01G127500.1 Wheat plasma membrane 49.12 46.86
Zm00001d041653_P001 Maize plastid 44.78 46.5
Zm00001d009706_P001 Maize cytosol, peroxisome, plasma membrane 38.68 46.44
TraesCS3D01G228400.1 Wheat cytosol, nucleus, plasma membrane 46.55 46.18
Zm00001d044181_P001 Maize plasma membrane 46.55 46.03
Os01t0623200-01 Rice cytosol, peroxisome, plasma membrane 48.48 45.9
TraesCSU01G001600.1 Wheat plasma membrane 44.78 45.74
OQU77336 Sorghum cytosol 38.52 45.63
TraesCS1D01G433200.1 Wheat plasma membrane 45.1 45.54
TraesCS1D01G433100.1 Wheat plasma membrane 42.86 45.49
Zm00001d011393_P001 Maize cytosol, peroxisome, plasma membrane 46.23 45.43
TraesCS1B01G456200.1 Wheat plasma membrane 45.75 45.38
TraesCS3B01G018300.1 Wheat mitochondrion 39.81 45.34
TraesCSU01G001400.1 Wheat plasma membrane, plastid 45.59 45.22
TraesCS1D01G432900.1 Wheat plasma membrane 44.78 44.93
Zm00001d009705_P001 Maize plasma membrane 41.09 44.83
TraesCS1B01G456400.1 Wheat plasma membrane 43.18 44.68
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 42.86 44.65
TraesCS1A01G424500.1 Wheat plasma membrane 42.7 44.56
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 43.02 44.44
CDY19015 Canola plastid 45.43 44.43
Os01t0226600-02 Rice endoplasmic reticulum, peroxisome, plasma membrane 46.71 44.36
TraesCS1B01G456500.1 Wheat plasma membrane 42.86 44.35
TraesCS1B01G456300.1 Wheat plasma membrane 43.98 44.26
CDX89215 Canola plastid 45.1 44.11
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 40.29 43.88
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 45.1 43.63
CDY14262 Canola plastid 45.1 43.36
Os07t0181100-01 Rice cytosol, peroxisome, plasma membrane 43.18 43.11
TraesCS3A01G225100.1 Wheat plasma membrane 47.03 43.02
TraesCS1D01G432500.1 Wheat plasma membrane 42.22 42.9
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 40.93 42.86
Zm00001d039150_P001 Maize plasma membrane 41.25 42.69
TraesCSU01G001500.1 Wheat plasma membrane 46.07 42.64
EES20021 Sorghum plastid 42.54 42.6
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 38.2 41.18
CDX98059 Canola cytosol, peroxisome, plastid 36.28 40.72
Zm00001d039314_P001 Maize plasma membrane 48.15 40.54
KXG22628 Sorghum plastid 41.73 40.5
CDY30084 Canola plasma membrane 36.28 38.57
KXG31512 Sorghum plasma membrane 47.51 37.0
CDY19522 Canola endoplasmic reticulum 11.72 36.68
OQU87187 Sorghum plasma membrane 46.87 36.27
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 11.24 36.27
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 11.72 35.96
CDY12936 Canola plasma membrane 19.1 31.23
CDY24881 Canola extracellular 9.47 30.73
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 18.94 30.49
CDY03280 Canola plasma membrane 18.62 29.59
CDY08628 Canola golgi, peroxisome, plasma membrane 18.3 29.46
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 3.37 25.61
CDY19523 Canola cytosol, extracellular, plasma membrane 4.17 20.47
CDY12934 Canola cytosol, extracellular, plasma membrane 4.49 20.44
CDY08625 Canola plasma membrane 5.94 18.41
CDX97407 Canola cytosol 0.64 2.7
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:A0A078DDL6EnsemblPlants:CDX87147ProteinID:CDX87147ProteinID:CDX87147.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0006810GO:GO:0006873
GO:GO:0008150GO:GO:0008308GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0019725
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00146063001InterPro:IPR038665PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF21
InterPro:SLAC/SLAHTMHMM:TMhelixUniParc:UPI0004EEC281InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg
Description
BnaC09g04620D
Coordinates
chrLK031849:+:776925..779510
Molecular Weight (calculated)
71061.5 Da
IEP (calculated)
7.195
GRAVY (calculated)
-0.106
Length
623 amino acids
Sequence
(BLAST)
001: MEERSSCVQI QVEEELPTLL RRATTEEMLG FDNYKESNLP LPHFISRFHH SHASTTNLNG QEASREAMEE TTPWTMPKHQ RKPSLSMPTS PNVLMISDPT
101: SSSSDNNNNI GPSTGKSVKF ISQPMTKVSS LYMETGNDDD DRRRHDHHYH QSGRLQNQNP AMDKLKDHRY NSFKTWSGKL ERQFTRKPAS IEPETPNRAE
201: ENLNTHEAMP VDRYYAALEG PELETLRPQE EIVLPSEQTW PFLLRYPIST FGMCLGVSSQ AIMWKTLATA EPTKFLHIPL WINEVLWFIS VALILTIATI
301: YLLKIILYFE AVRREYYHPI RINFFFAPFI SLLFLALGVP PSIATELPQF LWYLLMFPFI CLELKIYGQW MSGGQRRLSR VANPTNHLSI VGNFVGALLG
401: ASMGLREGPI FFYAVGMAHY LVLFVTLYQR LPTNETLPKD LHPVFFLFVA APSVASMAWA KITDSFDYGS KVCYFIAIFL YFSLAVRINF FRGIKFSLSW
501: WAYTFPMTGA AIATIRYATV VRSTMTQVMC VILCAIATLV VFALLVTTII HAFVTCELFP NDYAIAISNR PRPKQTSHHR WLDQLRNVSS ENIENYLKFT
601: DSDSSHSNDL EAGNGKAQES DSA
Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)
001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS
Arabidopsis Description
SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.