Factsheet for TraesCS3B01G178600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G159600.1	Wheat	cytosol, peroxisome, plasma membrane	93.36	93.2
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	93.36	92.74
HORVU3Hr1G030850.3	Barley	cytosol	40.7	72.06
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	44.52	66.67
Os01t0226600-02	Rice	endoplasmic reticulum, peroxisome, plasma membrane	71.43	65.55
CDX84361	Canola	plasma membrane	38.21	58.97
TraesCS1B01G388600.1	Wheat	plasma membrane	36.21	58.45
Zm00001d039314_P001	Maize	plasma membrane	70.43	57.3
KRH38307	Soybean	golgi, plasma membrane, plastid	38.7	56.28
KXG31512	Sorghum	plasma membrane	71.59	53.88
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	52.16	53.86
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	49.5	53.69
HORVU3Hr1G030840.1	Barley	cytosol	45.35	53.63
Bra026471.1-P	Field mustard	cytosol, plastid	48.84	52.78
CDY29871	Canola	plastid	43.52	52.72
Bra040840.1-P	Field mustard	plastid	43.36	52.52
CDX92855	Canola	plastid	43.36	52.41
TraesCS1B01G147400.1	Wheat	plasma membrane	55.15	52.28
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	54.15	51.99
PGSC0003DMT400074359	Potato	plasma membrane	51.49	51.84
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	43.19	51.79
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	52.66	51.46
KRH38311	Soybean	cytosol, nucleus, plasma membrane	50.5	50.92
KRH08776	Soybean	cytosol, nucleus, plasma membrane	50.33	50.75
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	51.83	50.57
TraesCS1B01G455100.1	Wheat	plasma membrane	45.02	50.56
AT4G27970.6	Thale cress	plastid	43.36	50.29
GSMUA_Achr7P14260_001	Banana	cytosol	49.5	50.0
Solyc09g014610.2.1	Tomato	plasma membrane	49.17	49.83
KRH08775	Soybean	cytosol, nucleus, plasma membrane	48.01	49.49
TraesCS3B01G018300.1	Wheat	mitochondrion	44.85	49.36
CDX87147	Canola	cytosol, nucleus, plasma membrane	50.33	48.64
TraesCS3B01G254700.1	Wheat	cytosol, peroxisome, plasma membrane	49.67	48.3
KRH35219	Soybean	cytosol	44.35	47.59
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	50.17	47.56
CDX80404	Canola	cytosol	50.17	47.48
Bra009724.1-P	Field mustard	cytosol	50.17	47.48
TraesCS1B01G456300.1	Wheat	plasma membrane	48.34	47.01
TraesCS1B01G456100.1	Wheat	cytosol, peroxisome, plasma membrane	46.18	46.49
TraesCS1B01G456200.1	Wheat	plasma membrane	48.34	46.34
Bra029390.1-P	Field mustard	cytosol	49.17	46.25
TraesCS1B01G456400.1	Wheat	plasma membrane	45.85	45.85
TraesCS1B01G456500.1	Wheat	plasma membrane	45.51	45.51
CDY44267	Canola	cytosol	46.18	45.28
CDY46973	Canola	cytosol	45.85	44.66
TraesCS1B01G456000.1	Wheat	cytosol, peroxisome, plasma membrane	39.53	41.18
CDY19015	Canola	plastid	43.02	40.66
CDX88065	Canola	cytosol	50.17	40.54
Bra026294.1-P	Field mustard	plastid	42.86	40.44
CDX89215	Canola	plastid	42.69	40.35
CDY14262	Canola	plastid	43.02	39.97
Bra010388.1-P	Field mustard	plastid	42.86	39.81
TraesCS2B01G416100.1	Wheat	plastid	36.54	37.93
TraesCS3B01G199200.1	Wheat	plasma membrane	23.42	36.06

Protein Annotations

EnsemblPlants:TraesCS3B01G178600.1	EnsemblPlantsGene:TraesCS3B01G178600	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF5	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:183082463..183084535

Molecular Weight (calculated)

67222.1 Da

IEP (calculated)

8.228

GRAVY (calculated)

0.083

Length

602 amino acids

Sequence
(BLAST)

001: METDESVRQG AAGARVQASR FAEEQAFRER HGDPMMASPG QDSPFDASAL RVAAHPVSVS LPASPSRFDV ARTEAEFPPR HAAAIVPDES HMLPLSPRPS
101: PMVSIAFEHV EKVVFRSQPI HAADSELSNA QDSQSQVVHD DSMSRGSGAR MGRSKARRDT SYDSFKTWSG KLEKQLTTHL RVVRQPPQQE AEPEEDEDAA
201: TSGRPYSMPR VHRFFAALEG PELDKLRSSE ELVLPSDKKW PFLLRFPVSA FGMCLGMSSQ AILWKNIAIS ASTRFLHITL RTNLVLWCVS VALMCFVSAL
301: YACKVIFYFE AVRREYYHPI RVNFFFAPWI ACLFLAIGVP EMVVGSLPHW LWYVLMAPIV CLELKIYGQW ISGGQRRLSR VANPSNHLSI VGNFVGALLG
401: AIMGLREGPI FFFAVGLAHY IVLFVTLYQR LPTSETLPRD LHPVFFLFVA APSVACLAWA RITGEFGYGS RIAYFIAMFL YASLAVRLNM FRGFRFSLAW
501: WAYTFPMTSA AIASIRYSSE VKNAFTQAMC IVLSVVATLT VTALLLTTLL HATVHHDLFP NDISIAISER RPKQSTIAEL NEVHGNKDAD TAYRDLEAAY
601: RP

Best Arabidopsis Sequence Match ( AT5G24030.2 )
(BLAST)

001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIK

Arabidopsis Description

SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.