Factsheet for TraesCS2B01G416100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G094480.1	Barley	endoplasmic reticulum, extracellular	16.21	100.0
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	98.1	98.96
TraesCS2D01G395700.1	Wheat	plastid	98.97	98.12
OQU82188	Sorghum	plastid	84.66	75.19
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	68.62	68.27
GSMUA_Achr8P12070_001	Banana	cytosol	58.28	67.74
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	61.72	66.3
GSMUA_Achr5P20180_001	Banana	cytosol	64.66	66.02
VIT_02s0025g04930.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	58.97	65.27
Solyc08g079770.2.1	Tomato	cytosol, peroxisome, plastid	58.62	61.26
PGSC0003DMT400009999	Potato	cytosol	58.62	60.71
AT1G12480.1	Thale cress	cytosol, nucleus, plasma membrane	57.93	60.43
Bra019770.1-P	Field mustard	cytosol, peroxisome, plastid	57.24	59.82
CDX98059	Canola	cytosol, peroxisome, plastid	56.9	59.46
CDY30084	Canola	plasma membrane	57.59	57.0
TraesCS1B01G388600.1	Wheat	plasma membrane	32.24	50.13
Zm00001d002603_P001	Maize	nucleus	83.1	45.47
TraesCS1B01G455100.1	Wheat	plasma membrane	37.41	40.49
TraesCS3B01G018300.1	Wheat	mitochondrion	37.41	39.67
TraesCS3B01G254700.1	Wheat	cytosol, peroxisome, plasma membrane	41.72	39.1
TraesCS1B01G456100.1	Wheat	cytosol, peroxisome, plasma membrane	39.31	38.13
TraesCS1B01G456300.1	Wheat	plasma membrane	40.52	37.96
TraesCS1B01G456400.1	Wheat	plasma membrane	38.79	37.38
TraesCS1B01G456500.1	Wheat	plasma membrane	38.79	37.38
TraesCS1B01G456200.1	Wheat	plasma membrane	40.0	36.94
TraesCS3B01G178600.1	Wheat	cytosol, peroxisome, plasma membrane	37.93	36.54
TraesCS1B01G147400.1	Wheat	plasma membrane	39.14	35.75
TraesCS3B01G199200.1	Wheat	plasma membrane	23.1	34.27
TraesCS1B01G456000.1	Wheat	cytosol, peroxisome, plasma membrane	33.28	33.39

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006820	GO:GO:0006873
GO:GO:0006950	GO:GO:0008150	GO:GO:0008308	GO:GO:0008509	GO:GO:0009270	GO:GO:0009628
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0010037	GO:GO:0010118	GO:GO:0010193
GO:GO:0015698	GO:GO:0015711	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0019901
GO:GO:0019903	GO:GO:0050891	GO:GO:0055085	GO:GO:0090332	GO:GO:1902456	InterPro:IPR038665
PFAM:PF03595	PANTHER:PTHR31269	PANTHER:PTHR31269:SF11	InterPro:SLAC/SLAH	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G416100
EnsemblPlants:TraesCS2B01G416100.1	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf	TIGR:cd09323	SEG:seg	:

Description

No Description!

Coordinates

chr2B:-:594845272..594847182

Molecular Weight (calculated)

63190.7 Da

IEP (calculated)

10.349

GRAVY (calculated)

0.101

Length

580 amino acids

Sequence
(BLAST)

001: MSGAEPSAAA AGAGAGNGQH AAVDIRTAAQ QPEEPRQTSM SGPLNLRSDR RPPPAQRAFS RQVSLGSGVT VMGMDRGGRN GGRPGQRALP RSGKSLGVLN
101: HSGGLGPDGA PRRGGDFSMF RTKSTLSKQN SMLPSRIKEE LDGVDLDHVE GQPTGRPDVD PLNKSVPAGR YFAALRGPEL DEVRDYEDIL LPKDEVWPFL
201: LRFPIGCFGV CLGLGSQAIL WGALAASPAM GFLRVTPMIN VAVWLLATAV LVATSVTYAL KCVFYFEAIR REFFHPVRVN FFFTPSIAAM FLAIGLPRAF
301: APARLHPAVW CAFVAPLFAL ELKIYGQWLS GGKRRLCKVA NPSSHLSVVG NFVGAILAAR VGWEEAGKFL WAIGVSHYIV VFVTLYQRLP TNEALPMELH
401: PVYSMFIATP SAASLAWAAI YGSFDAVART FFFMALFLYM SLVVRINFFR GFRFSIAWWS YTFPMTTASL ATVKYAEAVP CFTSRALALS LSLMSTTMVS
501: LLLVSTLLHA FYWRSLFPND LAIAITKDRQ SGAGRPHGKG RKAGKRVNDI KRWAKQVPLS VVSSITKSNS ADKEEEEKTD

Best Arabidopsis Sequence Match ( AT1G12480.1 )
(BLAST)

001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH

Arabidopsis Description

SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.