Factsheet for GSMUA_Achr8P12070_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G094480.1	Barley	endoplasmic reticulum, extracellular	14.43	76.6
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	74.95	69.26
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	76.55	65.52
VIT_02s0025g04930.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	67.33	64.12
GSMUA_Achr5P20180_001	Banana	cytosol	72.95	64.08
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	67.74	58.78
TraesCS2D01G395700.1	Wheat	plastid	68.34	58.29
TraesCS2B01G416100.1	Wheat	plastid	67.74	58.28
Solyc08g079770.2.1	Tomato	cytosol, peroxisome, plastid	64.33	57.84
Bra019770.1-P	Field mustard	cytosol, peroxisome, plastid	64.13	57.66
AT1G12480.1	Thale cress	cytosol, nucleus, plasma membrane	64.13	57.55
PGSC0003DMT400009999	Potato	cytosol	64.53	57.5
CDX98059	Canola	cytosol, peroxisome, plastid	63.93	57.48
CDY30084	Canola	plasma membrane	64.33	54.78
OQU82188	Sorghum	plastid	69.54	53.14
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	39.48	49.01
GSMUA_Achr9P05400_001	Banana	plastid	42.28	47.31
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	40.68	39.88
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	47.49	39.63
GSMUA_Achr2P06370_001	Banana	nucleus	8.62	37.39
GSMUA_Achr6P07610_001	Banana	golgi, mitochondrion, plasma membrane, plastid	25.05	36.98
GSMUA_Achr7P14260_001	Banana	cytosol	43.89	36.74
GSMUA_Achr9P21990_001	Banana	plasma membrane	26.25	34.66
GSMUA_Achr10P...	Banana	endoplasmic reticulum	24.65	34.07
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	25.65	33.33
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	25.25	33.07
Zm00001d002603_P001	Maize	nucleus	68.54	32.26

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0006810	GO:GO:0006873	GO:GO:0008150	GO:GO:0008308	GO:GO:0009987	GO:GO:0015698
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0055085	GO:GO:0098656	EnsemblPlantsGene:GSMUA_Achr8G12070_001
EnsemblPlants:GSMUA_Achr8P12070_001	EnsemblPlants:GSMUA_Achr8T12070_001	InterPro:IPR038665	UniProt:M0TPR0	PFAM:PF03595	PANTHER:PTHR31269
PANTHER:PTHR31269:SF11	InterPro:SLAC/SLAH	TMHMM:TMhelix	UniParc:UPI000296C3F8	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
SEG:seg	:	:	:	:	:

Description

C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G12070_001]

Coordinates

chr8:+:8793069..8794716

Molecular Weight (calculated)

55222.5 Da

IEP (calculated)

9.693

GRAVY (calculated)

0.314

Length

499 amino acids

Sequence
(BLAST)

001: MAILSRQISL ESGIAWVETE EKEVQGRRSS DAKEEPRVVL SRNSRSCGAP GATAGNAGQR KGDFSMFRTK SALVSRQNSF LSSRKESGPD LNHADGVPGL
101: AGTDDRVNKS VSAGRYFAAL RGPELDQVRD CEDILLPKGE VWPFLLRFPI GCFGMCLGLG SQAILWRALA SSPAMAFLHV TPDINLVFWL LALVVFVFVS
201: ITYILKCVFY FEAICREYYH PVRVNFFFAP WIACMFLAIG APARLAPKQP HPAIWCTLIA PVFVLELKIY GQWLSGGKRR LCKVANPSCH LSVVGNFVGA
301: ILAAKVGWEE AGKLLWAVGL AHYLCLFVTL YQRLPTTQAL PKELHPVYSM FIATPAAASI AWSAIYGKFD AVARTFYFIA LFLYCSLIVR INFFRGFKFS
401: VAWWSYTFPM TTASVATIKY AEEVPCFFTK GLAVSLSVIS STMVFLLLLS TLLHALVWRS LFPNDVAIAI AKDGNGGTRL RGTDKAAAAQ RRYDPKRWA

Best Arabidopsis Sequence Match ( AT1G12480.1 )
(BLAST)

001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH

Arabidopsis Description

SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.