Factsheet for GSMUA_Achr5P06840_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	74.38	58.74
Zm00001d010430_P001	Maize	plasma membrane	47.76	58.72
GSMUA_Achr9P05400_001	Banana	plastid	62.94	56.73
GSMUA_Achr2P06370_001	Banana	nucleus	15.92	55.65
CDX84361	Canola	plasma membrane	52.74	54.36
KRH38307	Soybean	golgi, plasma membrane, plastid	51.49	50.0
CDX92855	Canola	plastid	61.44	49.6
Bra040840.1-P	Field mustard	plastid	61.19	49.5
CDY29871	Canola	plastid	61.19	49.5
GSMUA_Achr7P14260_001	Banana	cytosol	72.64	48.99
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	72.14	48.49
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	60.2	48.21
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	65.92	47.75
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	68.41	47.17
AT4G27970.6	Thale cress	plastid	60.2	46.63
PGSC0003DMT400074359	Potato	plasma membrane	67.91	45.65
KRH38311	Soybean	cytosol, nucleus, plasma membrane	67.66	45.56
KRH08776	Soybean	cytosol, nucleus, plasma membrane	67.16	45.23
HORVU3Hr1G030850.3	Barley	cytosol	38.06	45.0
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	70.15	44.98
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	68.41	44.64
Solyc09g014610.2.1	Tomato	plasma membrane	65.92	44.61
Bra026471.1-P	Field mustard	cytosol, plastid	61.69	44.52
TraesCS3B01G178600.1	Wheat	cytosol, peroxisome, plasma membrane	66.67	44.52
Os01t0385400-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	69.15	44.48
TraesCS3D01G159600.1	Wheat	cytosol, peroxisome, plasma membrane	65.92	43.95
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.16	43.76
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	65.92	43.73
KXG28459	Sorghum	cytosol, peroxisome, plasma membrane	56.97	43.54
TraesCS1D01G126500.1	Wheat	cytosol, peroxisome, plasma membrane	65.17	43.38
OQU77636	Sorghum	cytosol, peroxisome, plasma membrane	67.41	43.15
KRH08775	Soybean	cytosol, nucleus, plasma membrane	62.44	42.98
KRH35219	Soybean	cytosol	59.7	42.78
Os05t0219900-01	Rice	cytosol, peroxisome, plasma membrane, plastid	66.17	42.77
Zm00001d037816_P001	Maize	plasma membrane	67.16	42.45
Zm00001d041653_P001	Maize	plastid	61.44	41.17
TraesCS1B01G147400.1	Wheat	plasma membrane	64.68	40.94
Os01t0226600-02	Rice	endoplasmic reticulum, peroxisome, plasma membrane	66.42	40.7
TraesCS1A01G127500.1	Wheat	plasma membrane	64.93	39.97
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	62.94	39.84
CDX87147	Canola	cytosol, nucleus, plasma membrane	61.44	39.65
GSMUA_Achr8P12070_001	Banana	cytosol	49.01	39.48
CDX80404	Canola	cytosol	62.19	39.31
Bra009724.1-P	Field mustard	cytosol	61.94	39.15
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	62.69	39.13
CDY44267	Canola	cytosol	59.2	38.76
Os07t0181100-01	Rice	cytosol, peroxisome, plasma membrane	59.95	38.62
CDY46973	Canola	cytosol	59.2	38.51
Bra029390.1-P	Field mustard	cytosol	60.7	38.12
CDY19015	Canola	plastid	59.95	37.83
Bra026294.1-P	Field mustard	plastid	59.95	37.77
CDX89215	Canola	plastid	59.7	37.68
CDY14262	Canola	plastid	60.2	37.35
Bra010388.1-P	Field mustard	plastid	59.95	37.19
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	49.75	37.04
Zm00001d039314_P001	Maize	plasma membrane	65.17	35.41
GSMUA_Achr5P20180_001	Banana	cytosol	50.0	35.39
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	50.0	34.48
CDX88065	Canola	cytosol	62.19	33.56
KXG31512	Sorghum	plasma membrane	65.67	33.0
HORVU3Hr1G030840.1	Barley	cytosol	40.3	31.83
GSMUA_Achr6P07610_001	Banana	golgi, mitochondrion, plasma membrane, plastid	25.62	30.47
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	28.61	29.95
GSMUA_Achr10P...	Banana	endoplasmic reticulum	26.37	29.36
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	27.11	28.61
GSMUA_Achr9P21990_001	Banana	plasma membrane	26.87	28.57

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0006810	GO:GO:0006873	GO:GO:0008150	GO:GO:0008308	GO:GO:0009987	GO:GO:0015698
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0055085	GO:GO:0098656	EnsemblPlantsGene:GSMUA_Achr5G06840_001
EnsemblPlants:GSMUA_Achr5P06840_001	EnsemblPlants:GSMUA_Achr5T06840_001	InterPro:IPR038665	UniProt:M0SWB3	PFAM:PF03595	PANTHER:PTHR31269
PANTHER:PTHR31269:SF2	InterPro:SLAC/SLAH	TMHMM:TMhelix	UniParc:UPI0002949153	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
SEG:seg	:	:	:	:	:

Description

C4-dicarboxylate transporter/malic acid transport protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G06840_001]

Coordinates

chr5:+:4981738..4983448

Molecular Weight (calculated)

45023.1 Da

IEP (calculated)

9.518

GRAVY (calculated)

0.343

Length

402 amino acids

Sequence
(BLAST)

001: MPRNCRFKDK RYDSFKTWSG KLERQISTLR GKPQEPEEVN DSKNTKPEAV PADRFFDALE GPELDKLKAS EELVLPEDKK WPFLLRFPVS SFGMCLGVSS
101: QAILWKTLAT SPSTSFLHIS PTVNLVLWCI SLALMGIVSA IYVLKIIFYF EAIRREYYHP IRVNFFFAPW IACLFLAIGM PPSVAVNLHA ALWYVLMAPI
201: FFLELKIYGQ WMSGGQRRLS KRLPTNETLP RDLHPVFFLF VAAPSVACMA WAKITGDFGY GSKIAYFIAL FLYASLAVRI NFFRGFRFSL AWWAYTFPMT
301: AAAIATIRYS TEVKNVFTQT LSVALSVIST ITVAALLFST VVHAFVLRDL FANDIAIAIS GKIAKSSTKD DARIIASSSN TADVEAPVDG LLLPVLSGEP
401: MI

Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)

001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS

Arabidopsis Description

SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.