Factsheet for TraesCS1D01G126500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
plastid 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G147400.1	Wheat	plasma membrane	97.68	92.91
TraesCS1A01G127500.1	Wheat	plasma membrane	97.52	90.2
Os05t0219900-01	Rice	cytosol, peroxisome, plasma membrane, plastid	69.04	67.04
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	43.38	65.17
CDX84361	Canola	plasma membrane	38.58	59.74
KRH38307	Soybean	golgi, plasma membrane, plastid	39.9	58.21
TraesCS3D01G159600.1	Wheat	cytosol, peroxisome, plasma membrane	55.63	55.72
CDX92855	Canola	plastid	45.86	55.62
CDY29871	Canola	plastid	45.7	55.53
Bra040840.1-P	Field mustard	plastid	45.53	55.33
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	52.65	54.55
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	49.34	53.69
Bra026471.1-P	Field mustard	cytosol, plastid	49.17	53.32
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	44.04	52.99
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	53.81	52.76
KRH08776	Soybean	cytosol, nucleus, plasma membrane	51.99	52.6
PGSC0003DMT400074359	Potato	plasma membrane	51.99	52.51
KRH38311	Soybean	cytosol, nucleus, plasma membrane	51.82	52.43
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	52.65	51.54
AT4G27970.6	Thale cress	plastid	43.87	51.06
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	52.65	50.72
Solyc09g014610.2.1	Tomato	plasma membrane	49.67	50.51
TraesCS1D01G432800.1	Wheat	plasma membrane	48.34	50.34
KRH08775	Soybean	cytosol, nucleus, plasma membrane	48.34	50.0
TraesCS3D01G228400.1	Wheat	cytosol, nucleus, plasma membrane	51.16	49.2
KRH35219	Soybean	cytosol	45.7	49.2
CDX87147	Canola	cytosol, nucleus, plasma membrane	50.66	49.12
GSMUA_Achr7P14260_001	Banana	cytosol	48.34	48.99
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	51.16	48.66
TraesCS1D01G433200.1	Wheat	plasma membrane	49.17	48.14
Bra009724.1-P	Field mustard	cytosol	50.17	47.64
CDX80404	Canola	cytosol	50.17	47.64
TraesCS1D01G433100.1	Wheat	plasma membrane	45.86	47.19
TraesCS1D01G432900.1	Wheat	plasma membrane	48.51	47.18
TraesCS1D01G432700.1	Wheat	cytosol, peroxisome, plasma membrane	47.02	47.1
Bra029390.1-P	Field mustard	cytosol	49.34	46.56
CDY44267	Canola	cytosol	46.36	45.6
CDY46973	Canola	cytosol	46.36	45.31
TraesCS3D01G017800.1	Wheat	mitochondrion, plasma membrane	44.21	44.87
TraesCS1D01G432500.1	Wheat	plasma membrane	45.53	44.86
Bra026294.1-P	Field mustard	plastid	43.87	41.54
CDY14262	Canola	plastid	44.54	41.51
Bra010388.1-P	Field mustard	plastid	44.54	41.51
CDX89215	Canola	plastid	43.71	41.44
CDY19015	Canola	plastid	43.71	41.44
CDX88065	Canola	cytosol	50.33	40.81
TraesCS2D01G395700.1	Wheat	plastid	37.09	38.29
TraesCS3D01G174800.1	Wheat	plasma membrane	22.85	35.48

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006873	GO:GO:0008150	GO:GO:0008308	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0019725	GO:GO:0055085	InterPro:IPR038665	PFAM:PF03595	PANTHER:PTHR31269	PANTHER:PTHR31269:SF2
InterPro:SLAC/SLAH	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G126500	EnsemblPlants:TraesCS1D01G126500.1	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
TIGR:cd09323	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:137967068..137969724

Molecular Weight (calculated)

65969.9 Da

IEP (calculated)

9.156

GRAVY (calculated)

0.103

Length

604 amino acids

Sequence
(BLAST)

001: MEANTSSKTS GVPSLLANVE VSHLDGFDTT TPMQSPKPVL HPDTGRPARM RPPERVAPRS EAVIPAFDSP FNPPGQRSGH PVSISLPSSP TGFGEPLVAP
101: GGDLHERKQA MSNAAQEPAQ HVRFVQPHRV MFRSQPNPGG VPTHAVRRMG SRGGRTMNRD KRYDSFKTFS GKLERQITHL AGGGVPVSTP EEEEFAQGQG
201: EAVSGDNVDR FFAALEGPEL DKLKSSEELA LPADKKWPFL LRFPISAFGM CLGVSSQAIL YKTIATAAPT EFLHVNPKVN LVLWFISVGL MSIITAAYAF
301: KIIFFFEAVR REYYHPIRVN FFFAPWIACL FLAMGVPPSV ATQLPPWLWY ALMSPFLCLE LKIYGQWMSG GQRRLSKVAN PSNHLSVVGN FVGALMGASM
401: GLKEGPIFFF GVGVAHYTVL FVTLYQRLPT NATLPKDLHP VFFLFVAAPS VASMAWAKIV DEFGVGAKLA YFIAMFLYAS LAVRINFFRG FMFSLSWWAY
501: TFPMTGAAIA SIRYATVVDN AFTKALCVGL SLLATLTVTG LFATTMVHAL VYHDLFPNDI AIAITDRKMK PIMELQESGK DDDSRSGSSK DVEAGATAAV
601: APEA

Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)

001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS

Arabidopsis Description

SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.