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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 4
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400021864 Potato cytosol, peroxisome, plastid 90.4 96.76
HORVU5Hr1G055480.1 Barley golgi 32.83 73.31
Zm00001d010430_P001 Maize plasma membrane 37.21 67.58
GSMUA_Achr5P06840_001 Banana cytosol, endoplasmic reticulum, peroxisome 44.61 65.92
Solyc03g007770.2.1 Tomato cytosol, nucleus, plasma membrane 62.96 64.15
Solyc06g036440.1.1 Tomato cytosol, peroxisome, plasma membrane 66.5 64.02
GSMUA_Achr9P05400_001 Banana plastid 47.64 63.45
KRH38307 Soybean golgi, plasma membrane, plastid 43.77 62.8
TraesCS1B01G388600.1 Wheat plasma membrane 38.38 61.13
VIT_16s0050g01860.t01 Wine grape cytosol, nucleus, plasma membrane 63.3 59.97
KRH08776 Soybean cytosol, nucleus, plasma membrane 59.26 58.96
TraesCSU01G204200.1 Wheat plasma membrane 25.93 58.33
KRH38311 Soybean cytosol, nucleus, plasma membrane 58.59 58.29
Bra026471.1-P Field mustard cytosol, plastid 52.86 56.37
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 48.15 56.19
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 56.57 56.19
KRH08775 Soybean cytosol, nucleus, plasma membrane 53.54 54.45
TraesCS1A01G423900.1 Wheat plasma membrane 44.78 52.78
GSMUA_Achr7P14260_001 Banana cytosol 52.36 52.18
AT5G24030.1 Thale cress cytosol, endoplasmic reticulum, nucleus 55.05 51.5
CDX87147 Canola cytosol, nucleus, plasma membrane 53.87 51.36
KRH35219 Soybean cytosol 48.48 51.34
CDX80404 Canola cytosol 54.38 50.79
KXG22629 Sorghum cytosol, peroxisome, plasma membrane 44.11 50.78
Bra009724.1-P Field mustard cytosol 54.21 50.63
TraesCS3B01G254700.1 Wheat cytosol, peroxisome, plasma membrane 52.69 50.57
Bra029390.1-P Field mustard cytosol 54.38 50.47
Zm00001d009706_P001 Maize cytosol, peroxisome, plasma membrane 43.6 49.9
Os01t0385400-01 Rice cytosol, endoplasmic reticulum, plasma membrane 52.36 49.76
Zm00001d044181_P001 Maize plasma membrane 52.69 49.68
TraesCS3D01G228400.1 Wheat cytosol, nucleus, plasma membrane 52.53 49.68
TraesCS1D01G126500.1 Wheat cytosol, peroxisome, plasma membrane 50.51 49.67
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 43.77 49.43
CDY46973 Canola cytosol 51.18 49.19
TraesCS3B01G178600.1 Wheat cytosol, peroxisome, plasma membrane 49.83 49.17
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 44.44 48.89
TraesCS1B01G455100.1 Wheat plasma membrane 44.11 48.88
CDY44267 Canola cytosol 50.51 48.86
TraesCS1D01G432800.1 Wheat plasma membrane 47.64 48.79
TraesCS3D01G159600.1 Wheat cytosol, peroxisome, plasma membrane 49.49 48.76
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 43.43 48.5
Zm00001d011393_P001 Maize cytosol, peroxisome, plasma membrane 51.52 48.27
Os05t0219900-01 Rice cytosol, peroxisome, plasma membrane, plastid 50.34 48.07
TraesCS3A01G151400.1 Wheat cytosol, peroxisome, plasma membrane 48.99 48.02
OQU77336 Sorghum cytosol 42.42 47.91
TraesCS3B01G018300.1 Wheat mitochondrion 44.11 47.9
TraesCS1B01G147400.1 Wheat plasma membrane 51.01 47.72
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 50.34 47.61
Os01t0623200-01 Rice cytosol, peroxisome, plasma membrane 52.53 47.42
Zm00001d037816_P001 Maize plasma membrane 50.51 47.17
Zm00001d009705_P001 Maize plasma membrane 45.12 46.94
Zm00001d041653_P001 Maize plastid 47.31 46.83
TraesCSU01G001600.1 Wheat plasma membrane 47.81 46.56
TraesCS1D01G433200.1 Wheat plasma membrane 48.32 46.52
TraesCS1A01G127500.1 Wheat plasma membrane 50.84 46.25
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 46.46 46.15
TraesCS3A01G225100.1 Wheat plasma membrane 52.86 46.11
TraesCS1D01G433100.1 Wheat plasma membrane 45.45 46.0
TraesCS1D01G432900.1 Wheat plasma membrane 47.98 45.89
TraesCS1B01G456200.1 Wheat plasma membrane 48.48 45.86
TraesCS1B01G456400.1 Wheat plasma membrane 46.46 45.85
TraesCS1B01G456500.1 Wheat plasma membrane 46.46 45.85
TraesCS1B01G456300.1 Wheat plasma membrane 47.47 45.56
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 43.77 45.45
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 46.13 45.44
TraesCSU01G001400.1 Wheat plasma membrane, plastid 47.98 45.38
TraesCS1A01G424500.1 Wheat plasma membrane 45.45 45.23
Os07t0181100-01 Rice cytosol, peroxisome, plasma membrane 47.47 45.19
Zm00001d039150_P001 Maize plasma membrane 45.45 44.85
Os01t0226600-02 Rice endoplasmic reticulum, peroxisome, plasma membrane 49.33 44.66
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 44.44 44.37
TraesCS1D01G432500.1 Wheat plasma membrane 45.45 44.05
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 47.14 43.48
EES20021 Sorghum plastid 45.45 43.41
TraesCSU01G001500.1 Wheat plasma membrane 49.16 43.39
CDX88065 Canola cytosol 54.21 43.22
KXG22628 Sorghum plastid 46.13 42.68
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 41.25 42.39
Solyc08g079770.2.1 Tomato cytosol, peroxisome, plastid 38.55 41.26
Zm00001d039314_P001 Maize plasma membrane 49.83 40.0
OQU87187 Sorghum plasma membrane 52.69 38.88
Solyc07g051950.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 22.73 37.82
KXG31512 Sorghum plasma membrane 49.66 36.88
Solyc03g031590.2.1 Tomato cytosol, peroxisome, plasma membrane 23.06 36.73
Solyc04g080990.1.1 Tomato cytosol, golgi, peroxisome 21.89 32.66
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0006810GO:GO:0006873GO:GO:0008150GO:GO:0008308GO:GO:0009987GO:GO:0015698
GO:GO:0016020GO:GO:0016021GO:GO:0019725GO:GO:0055085GO:GO:0098656InterPro:IPR038665
UniProt:K4CRT7PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF21InterPro:SLAC/SLAHEnsemblPlantsGene:Solyc09g014610.2
EnsemblPlants:Solyc09g014610.2.1TMHMM:TMhelixUniParc:UPI000276B920InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg
Description
No Description!
Coordinates
chr9:-:6258472..6261286
Molecular Weight (calculated)
66697.9 Da
IEP (calculated)
9.735
GRAVY (calculated)
0.109
Length
594 amino acids
Sequence
(BLAST)
001: MTGCILWVIV TDMIRTTKED YAQVIPSVSK TITCHHKTMK RFDSILEDTD LIDYQLDQAR CRSLNSLATG TKGATEQQSE TSTISISMPP TPSSKGVGFN
101: EIYSQTSTPR GTTTTQNNKR ISSYSQTSTP RGTVFPESPK LPRSNTNKLK DTRFDSFKTW SGRLERQLSA FRGKEQEPIS QPSPQIETIP VDRYFDALEG
201: PELDTLRASE EIILPEDRKW PFLLRFPISS FGICLGVSSQ AIMWKNLATS ASTNFLHVSL KANLGLWCIS AALMIIISFI YALKFIFYFE AVRREYYHPI
301: RVNFFFAPFI SLLFLALGLP TSITQHLHTS LWYILMLPIF CLELKLYGQW MSGGQRRLSK VANPSNHLSI VGNFVGALLG ASMGLKEGPI FFFAVGLAHY
401: IVMFVTLYQR LPTNDTLPKE LHPVFFLFVA APSVASMAWT AIQGSFDHGS RIAYFIALFL YFSLAVRINF FRGFKFSLAW WAYTFPMTGA GIATIKYSLV
501: VTNLVTKCLA IILSALSTLT VTGLLVTTII HAFVLRDLFP NDIAIAISKR PKATRKWYLG SSHSKDIDQY LKYVDSSKAK DIEASLTHIP NSSN
Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)
001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS
Arabidopsis Description
SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.