Factsheet for TraesCS1B01G456100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G432700.1	Wheat	cytosol, peroxisome, plasma membrane	95.15	94.36
TraesCS1B01G456400.1	Wheat	plasma membrane	71.91	71.43
TraesCS1B01G456300.1	Wheat	plasma membrane	72.58	70.11
TraesCS1B01G456200.1	Wheat	plasma membrane	73.41	69.9
TraesCS1B01G455100.1	Wheat	plasma membrane	60.37	67.35
TraesCS3B01G018300.1	Wheat	mitochondrion	61.54	67.28
TraesCS1B01G456500.1	Wheat	plasma membrane	67.73	67.28
TraesCS1B01G388600.1	Wheat	plasma membrane	40.8	65.42
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	54.35	62.98
Zm00001d009705_P001	Maize	plasma membrane	59.87	62.7
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	54.18	62.43
TraesCS1B01G456000.1	Wheat	cytosol, peroxisome, plasma membrane	60.03	62.11
EES20021	Sorghum	plastid	62.71	60.29
OQU77336	Sorghum	cytosol	52.51	59.7
Zm00001d039150_P001	Maize	plasma membrane	60.03	59.63
CDX84361	Canola	plasma membrane	37.63	57.69
GSMUA_Achr9P05400_001	Banana	plastid	42.64	57.17
KXG22628	Sorghum	plastid	60.03	55.92
TraesCS3B01G254700.1	Wheat	cytosol, peroxisome, plasma membrane	57.02	55.09
Bra040840.1-P	Field mustard	plastid	43.48	52.31
CDY29871	Canola	plastid	43.48	52.31
CDX92855	Canola	plastid	43.14	51.81
KRH38307	Soybean	golgi, plasma membrane, plastid	35.62	51.45
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	42.64	50.8
AT4G27970.6	Thale cress	plastid	43.65	50.29
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	42.47	49.9
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	49.83	49.83
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	45.99	49.55
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	47.16	48.37
Bra026471.1-P	Field mustard	cytosol, plastid	43.98	47.22
KRH38311	Soybean	cytosol, nucleus, plasma membrane	46.82	46.9
KRH08776	Soybean	cytosol, nucleus, plasma membrane	46.82	46.9
PGSC0003DMT400074359	Potato	plasma membrane	46.66	46.66
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	48.83	46.57
Solyc09g014610.2.1	Tomato	plasma membrane	46.15	46.46
TraesCS3B01G178600.1	Wheat	cytosol, peroxisome, plasma membrane	46.49	46.18
KRH08775	Soybean	cytosol, nucleus, plasma membrane	44.65	45.72
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	46.99	45.62
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	46.49	45.06
TraesCS1B01G147400.1	Wheat	plasma membrane	47.66	44.88
KRH35219	Soybean	cytosol	41.64	44.38
CDX87147	Canola	cytosol, nucleus, plasma membrane	44.65	42.86
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	45.15	42.52
Bra009724.1-P	Field mustard	cytosol	44.65	41.98
Bra029390.1-P	Field mustard	cytosol	44.82	41.88
CDX80404	Canola	cytosol	44.48	41.82
CDY44267	Canola	cytosol	41.81	40.72
CDY19015	Canola	plastid	43.31	40.66
CDY46973	Canola	cytosol	41.81	40.45
CDX89215	Canola	plastid	42.98	40.35
Bra026294.1-P	Field mustard	plastid	42.98	40.28
CDY14262	Canola	plastid	43.65	40.28
Bra010388.1-P	Field mustard	plastid	43.48	40.12
TraesCS3B01G199200.1	Wheat	plasma membrane	25.92	39.64
TraesCS2B01G416100.1	Wheat	plastid	38.13	39.31
CDX88065	Canola	cytosol	44.98	36.11

Protein Annotations

EnsemblPlants:TraesCS1B01G456100.1	EnsemblPlantsGene:TraesCS1B01G456100	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF6	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:670830980..670832867

Molecular Weight (calculated)

65951.5 Da

IEP (calculated)

7.887

GRAVY (calculated)

0.128

Length

598 amino acids

Sequence
(BLAST)

001: MVGAGNHHDV LTEATAAGGG RMKEAAVAAV HGESTTCGDT PPLSVSINVP DSRSALHPSR LPRTRDAGAA PPSETPLSEV QQPQLHAQPS MVLRGGGEVP
101: AVPRSDSTRE RDRRFDQFKT FSGRLERQLS TLRGVPQDPP APHLDDGASS NSDDDDVPTA DRYFAALEGP ELDTLRSTEV PVLPKDETWP FLLRFPISAF
201: GMCLGVNSQA MLWKTLESEP SMAFLHVHPT ANYVFWWVSV ALTVIVSVTY LLKVIFYFEA VRREFHHPVR VNFFFAPSIA CLFLVKGEPH PVWEIHHIVY
301: NLLMLPILCL GLKIYGQWMS SGERRLSKVA NPSNHLAVVG NFVGALLGAK MGLRELPIFF FAVGLAHYAV LFVTLYQRLP TNVQLPKELH PVFFLFVAAP
401: SVASMAWARI SGEFNDGAKL LYFISLFLYM SLVVRINLFT GFRFSLAWWA YTFPMTSVAL ATALYASEVD NLLTRALAVG LAVIAVVTVT AVLATTLYHA
501: FVCGDLFPND VSIAITRRKP KFSKMLSQIR SSSSDVKDLV LSIPNFSSSS KHSSSNSRVS SSAGECPVMA HVHERVERAF DRRCTTDCMH TRLAYIDQ

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.