Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 5
  • mitochondrion 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009705_P001 Maize plasma membrane 80.55 87.74
KXG22628 Sorghum plastid 90.51 87.69
HORVU3Hr1G005540.1 Barley golgi, plasma membrane 44.86 74.6
KXG22629 Sorghum cytosol, peroxisome, plasma membrane 59.16 71.32
TraesCS1A01G423900.1 Wheat plasma membrane 55.47 68.45
TraesCS1D01G433200.1 Wheat plasma membrane 67.2 67.75
TraesCS1D01G432800.1 Wheat plasma membrane 63.02 67.59
TraesCSU01G001600.1 Wheat plasma membrane 66.24 67.54
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 58.36 67.22
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 57.4 67.11
TraesCSU01G204200.1 Wheat plasma membrane 28.46 67.05
TraesCS1B01G455100.1 Wheat plasma membrane 57.56 66.79
TraesCS1B01G456300.1 Wheat plasma membrane 66.24 66.56
TraesCS1D01G432900.1 Wheat plasma membrane 66.08 66.18
TraesCS1B01G456200.1 Wheat plasma membrane 66.24 65.61
TraesCS1D01G433100.1 Wheat plasma membrane 61.41 65.08
TraesCSU01G001400.1 Wheat plasma membrane, plastid 65.59 64.97
TraesCS1A01G424500.1 Wheat plasma membrane 62.06 64.66
OQU77336 Sorghum cytosol 53.86 63.69
TraesCS3B01G018300.1 Wheat mitochondrion 55.95 63.62
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 61.09 63.02
TraesCS1B01G456500.1 Wheat plasma membrane 60.93 62.96
TraesCS1B01G456400.1 Wheat plasma membrane 60.77 62.79
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 60.29 62.71
HORVU1Hr1G092640.3 Barley mitochondrion 65.92 62.31
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 56.91 61.89
TraesCSU01G001500.1 Wheat plasma membrane 66.88 61.81
TraesCS1D01G432500.1 Wheat plasma membrane 59.97 60.85
HORVU1Hr1G092740.1 Barley mitochondrion, peroxisome, plasma membrane 58.84 60.5
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 57.56 60.17
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 53.7 57.79
CDX84361 Canola plasma membrane 36.17 57.69
GSMUA_Achr9P05400_001 Banana plastid 40.35 56.28
HORVU1Hr1G092660.2 Barley plastid 58.68 55.47
CDX92855 Canola plastid 41.64 52.01
Bra040840.1-P Field mustard plastid 41.48 51.91
CDY29871 Canola plastid 41.48 51.91
KRH38307 Soybean golgi, plasma membrane, plastid 34.08 51.21
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 41.64 50.88
AT4G27970.6 Thale cress plastid 42.28 50.67
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 48.55 50.5
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 40.51 50.2
Solyc03g007770.2.1 Tomato cytosol, nucleus, plasma membrane 45.66 48.71
PGSC0003DMT400021864 Potato cytosol, peroxisome, plastid 43.25 48.47
KRH08776 Soybean cytosol, nucleus, plasma membrane 45.5 47.4
KRH38311 Soybean cytosol, nucleus, plasma membrane 45.5 47.4
PGSC0003DMT400074359 Potato plasma membrane 45.5 47.32
Solyc06g036440.1.1 Tomato cytosol, peroxisome, plasma membrane 46.62 47.0
PGSC0003DMT400051388 Potato cytosol, nucleus, plasma membrane 46.46 46.92
OQU87187 Sorghum plasma membrane 60.13 46.46
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 39.07 46.2
Bra026471.1-P Field mustard cytosol, plastid 41.32 46.14
KRH08775 Soybean cytosol, nucleus, plasma membrane 43.25 46.06
Solyc09g014610.2.1 Tomato plasma membrane 43.41 45.45
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 45.82 45.38
VIT_16s0050g01860.t01 Wine grape cytosol, nucleus, plasma membrane 45.5 45.14
KRH35219 Soybean cytosol 40.68 45.1
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 44.21 42.7
CDX87147 Canola cytosol, nucleus, plasma membrane 42.6 42.54
AT5G24030.1 Thale cress cytosol, endoplasmic reticulum, nucleus 43.25 42.36
Bra029390.1-P Field mustard cytosol 43.41 42.19
CDX80404 Canola cytosol 42.6 41.67
Bra009724.1-P Field mustard cytosol 42.6 41.67
CDY19015 Canola plastid 42.44 41.44
Bra026294.1-P Field mustard plastid 42.44 41.38
CDX89215 Canola plastid 42.28 41.29
CDY46973 Canola cytosol 40.35 40.61
CDY44267 Canola cytosol 39.87 40.39
Bra010388.1-P Field mustard plastid 41.64 39.97
CDY14262 Canola plastid 41.0 39.35
CDX88065 Canola cytosol 42.77 35.7
OQU82188 Sorghum plastid 37.46 35.68
EER99979 Sorghum plastid 23.47 34.76
KXG31512 Sorghum plasma membrane 44.37 34.5
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10EntrezGene:8079295UniProt:C5YWJ1EnsemblPlants:EES20021ProteinID:EES20021
ProteinID:EES20021.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:IPR038665PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF6EnsemblPlantsGene:SORBI_3009G248500
TMHMM:TMhelixUniParc:UPI0001A893B8InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfRefSeq:XP_002441591.1SEG:seg
Description
hypothetical protein
Coordinates
chr9:-:58366679..58369123
Molecular Weight (calculated)
68153.3 Da
IEP (calculated)
9.559
GRAVY (calculated)
0.133
Length
622 amino acids
Sequence
(BLAST)
001: MSTSESVQMA GMAHGASRAR PLPEPLRLPL PLPPARATFV DGGRASGSPA AAARTAEATE TPRYSVAFSV PASPSGLHLG ACASVRSVAP PPQPVEHEHQ
101: HQNAEAAVLP QLLTQARYHS QPALTIRTEE PPPPLQRVRT VSRSDSTRDR RFDQFKTFSG RLERQLSNLR GVAVEIEPAA ADPNSNKMIS EEELADTDDD
201: GEVPTADRYF AALEGPELET LRPTEVSALP EDETWPFLLR FPINAFGMCL GVSSQAMLWK TLQSEPSTAF LHVSPAVNHA LWWVSVALMF LVSVTYLLKV
301: VFYFEAVRRE FHHPIRVNFF FAPWIACLFL VKGLPQPVAD VHHVVWYILM APILFLDLKI YGQWMSGGDR RLSKVANPTN HLAVVGNFVG ALLGAKMGLR
401: EVPIFFFAVG VVHYLVLFVT LYQRLPTNAQ LPKELHPVFF LFIAAPSVAS VGWARLCGDF NYAAKILYFT SLFLYMSLVV RINLFRGVRF SLAWWAYTFP
501: MTSVAIATAV YASAVTNVLT RALAVGLSGV ATVTVAGVLV TTVYRAFVRK DLFPNDVSIA VTQRPKAKFG KILAHIRASG DGVKDLVLAV SRHGSGSSGS
601: DTNYSASESP TSMARGRRRA EP
Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)
001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN
Arabidopsis Description
SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.