CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041653_P001	Maize	plastid	73.29	78.67
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	39.13	62.69
OQU77636	Sorghum	cytosol, peroxisome, plasma membrane	58.39	59.87
CDX84361	Canola	plasma membrane	35.09	57.95
KXG28459	Sorghum	cytosol, peroxisome, plasma membrane	45.81	56.08
KRH38307	Soybean	golgi, plasma membrane, plastid	34.94	54.35
CDY29871	Canola	plastid	41.3	53.52
Bra040840.1-P	Field mustard	plastid	41.3	53.52
Os07t0181100-01	Rice	cytosol, peroxisome, plasma membrane	51.71	53.37
CDX92855	Canola	plastid	41.15	53.21
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	40.37	51.79
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	40.68	50.78
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	43.63	50.63
AT4G27970.6	Thale cress	plastid	40.53	50.29
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	45.19	49.91
KRH38311	Soybean	cytosol, nucleus, plasma membrane	46.12	49.75
KRH08776	Soybean	cytosol, nucleus, plasma membrane	46.12	49.75
Bra026471.1-P	Field mustard	cytosol, plastid	42.86	49.55
PGSC0003DMT400074359	Potato	plasma membrane	45.81	49.33
GSMUA_Achr7P14260_001	Banana	cytosol	45.03	48.66
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	47.36	48.64
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	45.81	47.81
KRH08775	Soybean	cytosol, nucleus, plasma membrane	43.17	47.6
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	45.34	47.4
Solyc09g014610.2.1	Tomato	plasma membrane	43.48	47.14
KRH35219	Soybean	cytosol	40.22	46.17
OQU77336	Sorghum	cytosol	37.27	45.63
CDX87147	Canola	cytosol, nucleus, plasma membrane	43.63	45.1
CDX80404	Canola	cytosol	43.94	44.5
Bra009724.1-P	Field mustard	cytosol	43.79	44.34
EES20021	Sorghum	plastid	42.7	44.21
KXG31512	Sorghum	plasma membrane	54.81	44.12
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	43.17	43.78
Bra029390.1-P	Field mustard	cytosol	43.32	43.59
KXG22628	Sorghum	plastid	42.86	42.99
CDY44267	Canola	cytosol	40.68	42.67
CDY46973	Canola	cytosol	40.68	42.39
CDY19015	Canola	plastid	40.06	40.5
CDX89215	Canola	plastid	39.91	40.35
Bra026294.1-P	Field mustard	plastid	39.91	40.28
Bra010388.1-P	Field mustard	plastid	40.37	40.12
CDY14262	Canola	plastid	40.22	39.97
CDX88065	Canola	cytosol	43.94	37.99
OQU87187	Sorghum	plasma membrane	46.58	37.27
OQU82188	Sorghum	plastid	34.94	34.46
EER99979	Sorghum	plastid	22.2	34.05

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	UniProt:A0A1B6PFE0	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0006810	GO:GO:0006873	GO:GO:0008150	GO:GO:0008308	GO:GO:0009987
GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0055085	GO:GO:0098656
InterPro:IPR038665	EnsemblPlants:KXG24404	ProteinID:KXG24404	ProteinID:KXG24404.1	PFAM:PF03595	PANTHER:PTHR31269
PANTHER:PTHR31269:SF2	InterPro:SLAC/SLAH	EnsemblPlantsGene:SORBI_3007G037600	TMHMM:TMhelix	UniParc:UPI00081AC993	InterPro:Voltage-dep_anion_channel
InterPro:Voltage-dep_anion_channel_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:3645034..3647426

Molecular Weight (calculated)

70072.2 Da

IEP (calculated)

8.561

GRAVY (calculated)

0.055

Length

644 amino acids

Sequence
(BLAST)

001: MQETIAEATK AQGSKQQHIG TEGTEASLLT LLQDQRAMEA SGSKSGPMPP RNADAAVAHP KPPVHPPVPP PRRRSEVVLP PLETPQLQQP PAGFRAVQQH
101: VSSISLPASP GSSLGVLTPT AAATTDSADL RRQAMANAAR GGPGLHRLAA QDTGSNSVRF TFAQPDMDRE AMMFRSQPIP RPPPATTAAG RGSRHWHWHA
201: DRRYDSFKTW SGKLERQITH LAGGPNNDLD DDDVGDDDIG ISHRTHATSV PEVDRFYAAL EGPELDQLKP SEDLVLPSDT TWPFLLRFPI SAFGIPMGVS
301: SQAILWKAIT LSVPTTFLHV TSKVNLVLWC VSAALMAAAS ATYACKVALY FEAVRREYYH PIRVNFFFAP WIICLYLAIG VPHSVTWAAR LPHWLWYVLM
401: APLLCLGLKI YGQWMSGGQR RLSKVANPSN HLSLLGNFVG AQLGATMGLR EGPLFFFGVG VAHYVVLFVT LYQRLPTNET LPKELHPVFF LFVAAPSVSS
501: VAWSKITGEF GVFSKLAFFV GMFLYASLGV RINFFRGFRF SLAWWAYTSP MAGAAAAAIR YSAEVDNGFT RALCVALSAV ATLTVAALLA TTVVHAFVLR
601: NLFPNDICIA ITERKVKPIM ELHESSHGQE DLEATDATGA TAAA

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.