CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89215	Canola	plastid	99.22	99.22
CDX97407	Canola	cytosol	22.76	97.97
CDY14262	Canola	plastid	88.07	86.57
CDX92855	Canola	plastid	67.5	86.35
CDX84361	Canola	plasma membrane	52.59	85.9
CDY29871	Canola	plastid	66.88	85.71
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	65.15	82.67
AT4G27970.6	Thale cress	plastid	66.41	81.5
Zm00001d010430_P001	Maize	plasma membrane	30.93	60.24
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	37.83	59.95
TraesCS1B01G388600.1	Wheat	plasma membrane	33.28	56.84
TraesCSU01G204200.1	Wheat	plasma membrane	23.55	56.82
GSMUA_Achr9P05400_001	Banana	plastid	37.36	53.36
TraesCS1A01G423900.1	Wheat	plasma membrane	40.5	51.19
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	38.62	48.33
TraesCS1A01G423000.1	Wheat	cytosol, peroxisome, plasma membrane	40.66	47.96
TraesCS1B01G455100.1	Wheat	plasma membrane	40.35	47.95
TraesCS3A01G028100.1	Wheat	cytosol, peroxisome, plasma membrane	40.03	47.93
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	38.3	47.01
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	37.68	46.51
OQU77336	Sorghum	cytosol	38.3	46.39
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	43.49	46.32
TraesCS1D01G432800.1	Wheat	plasma membrane	41.6	45.69
Zm00001d009705_P001	Maize	plasma membrane	40.82	45.53
TraesCS3B01G018300.1	Wheat	mitochondrion	39.09	45.52
Os05t0219900-01	Rice	cytosol, peroxisome, plasma membrane, plastid	44.43	45.5
CDX87147	Canola	cytosol, nucleus, plasma membrane	44.43	45.43
TraesCS1B01G456400.1	Wheat	plasma membrane	42.54	45.02
TraesCSU01G001600.1	Wheat	plasma membrane	43.01	44.92
TraesCS1D01G433200.1	Wheat	plasma membrane	43.49	44.89
KXG28459	Sorghum	cytosol, peroxisome, plasma membrane	37.05	44.87
TraesCS1D01G433100.1	Wheat	plasma membrane	41.29	44.8
TraesCS3B01G254700.1	Wheat	cytosol, peroxisome, plasma membrane	43.33	44.59
CDX80404	Canola	cytosol	44.43	44.5
TraesCS1A01G424400.1	Wheat	plasma membrane, plastid	39.87	44.41
TraesCS1A01G424500.1	Wheat	plasma membrane	41.6	44.39
Zm00001d011393_P001	Maize	cytosol, peroxisome, plasma membrane	44.11	44.32
TraesCS1B01G456300.1	Wheat	plasma membrane	43.01	44.26
TraesCS1B01G456500.1	Wheat	plasma membrane	41.76	44.19
TraesCS1B01G456200.1	Wheat	plasma membrane	43.49	44.11
OQU77636	Sorghum	cytosol, peroxisome, plasma membrane	43.49	44.11
GSMUA_Achr7P14260_001	Banana	cytosol	41.13	43.96
TraesCS3D01G228400.1	Wheat	cytosol, nucleus, plasma membrane	43.33	43.95
Zm00001d044181_P001	Maize	plasma membrane	43.33	43.81
TraesCS1D01G126500.1	Wheat	cytosol, peroxisome, plasma membrane	41.44	43.71
TraesCS3D01G017800.1	Wheat	mitochondrion, plasma membrane	40.82	43.7
Os01t0385400-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	42.86	43.68
TraesCS1D01G432900.1	Wheat	plasma membrane	42.39	43.48
TraesCS3D01G159600.1	Wheat	cytosol, peroxisome, plasma membrane	41.13	43.45
TraesCS1B01G456100.1	Wheat	cytosol, peroxisome, plasma membrane	40.66	43.31
TraesCS1D01G432700.1	Wheat	cytosol, peroxisome, plasma membrane	40.82	43.12
TraesCS3B01G178600.1	Wheat	cytosol, peroxisome, plasma membrane	40.66	43.02
Os01t0623200-01	Rice	cytosol, peroxisome, plasma membrane	44.27	42.86
TraesCSU01G001400.1	Wheat	plasma membrane, plastid	42.23	42.83
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	40.66	42.74
Zm00001d039150_P001	Maize	plasma membrane	40.19	42.52
Zm00001d041653_P001	Maize	plastid	40.03	42.5
Zm00001d037816_P001	Maize	plasma membrane	42.39	42.45
EES20021	Sorghum	plastid	41.44	42.44
TraesCS1D01G432500.1	Wheat	plasma membrane	40.5	42.09
TraesCS1B01G147400.1	Wheat	plasma membrane	41.44	41.57
TraesCSU01G001500.1	Wheat	plasma membrane	43.64	41.31
CDY44267	Canola	cytosol	39.72	41.21
Os07t0181100-01	Rice	cytosol, peroxisome, plasma membrane	40.35	41.19
KXG22628	Sorghum	plastid	41.44	41.12
CDY46973	Canola	cytosol	39.72	40.94
TraesCS3A01G225100.1	Wheat	plasma membrane	43.64	40.82
CDX98059	Canola	cytosol, peroxisome, plastid	35.32	40.54
TraesCS1B01G456000.1	Wheat	cytosol, peroxisome, plasma membrane	36.73	40.48
TraesCS1A01G127500.1	Wheat	plasma membrane	41.44	40.43
Os01t0226600-02	Rice	endoplasmic reticulum, peroxisome, plasma membrane	41.44	40.24
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	40.5	40.06
CDY00627	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.93	39.38
CDY30084	Canola	plasma membrane	35.32	38.4
CDX88065	Canola	cytosol	44.58	38.12
CDY19522	Canola	endoplasmic reticulum	11.62	37.19
CDY12933	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.62	36.45
OQU87187	Sorghum	plasma membrane	44.11	34.91
Zm00001d039314_P001	Maize	plasma membrane	40.5	34.86
KXG31512	Sorghum	plasma membrane	40.97	32.62
CDY12936	Canola	plasma membrane	19.47	32.55
CDY24881	Canola	extracellular	9.73	32.29
CDY39794	Canola	endoplasmic reticulum, nucleus, plasma membrane	19.31	31.78
CDY03280	Canola	plasma membrane	19.31	31.38
CDY08628	Canola	golgi, peroxisome, plasma membrane	19.0	31.27
CDY00628	Canola	endoplasmic reticulum, extracellular, plasma membrane	3.45	26.83
CDY19523	Canola	cytosol, extracellular, plasma membrane	4.24	21.26
CDY12934	Canola	cytosol, extracellular, plasma membrane	4.55	21.17
CDY08625	Canola	plasma membrane	6.44	20.4

Protein Annotations

Gene3D:1.50.10.150	MapMan:19.2.2.5.2	MapMan:24.3.10	Gene3D:3.10.110.10	GO:A0A078FX99	UniProt:A0A078FX99
EnsemblPlants:CDY19015	ProteinID:CDY19015	ProteinID:CDY19015.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0006810	GO:GO:0006873	GO:GO:0008150
GO:GO:0008308	GO:GO:0009987	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0019725	GO:GO:0055085	GO:GO:0098656	EnsemblPlantsGene:GSBRNA2T00006260001	InterPro:IPR000608	InterPro:IPR016135
InterPro:IPR038665	PFAM:PF00179	PFAM:PF03595	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR31269
PANTHER:PTHR31269:SF2	MetaCyc:PWY-7511	InterPro:SLAC/SLAH	SMART:SM00212	SUPFAM:SSF54495	TMHMM:TMhelix
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniPathway:UPA00143	UniParc:UPI0004EE7DFC	InterPro:Voltage-dep_anion_channel
InterPro:Voltage-dep_anion_channel_sf	SEG:seg	:	:	:	:

Description

BnaC01g20530DBnaC01g20530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FX99]

Coordinates

chrLK032091:+:294526..299155

Molecular Weight (calculated)

72015.0 Da

IEP (calculated)

9.525

GRAVY (calculated)

0.083

Length

637 amino acids

Sequence
(BLAST)

001: MNNTRSASSS VSPATPDLLD NHRQSSCGEF SRLEKRMGPR NMTFHSKSMP RGSMFLDQEA FRSSHDKRYD LFRTMSGKLE RQISNLRGKP IDSSLQEEDK
101: EITESLPADR FFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTNAE RFLHLTQVVN HVLWWISLVL LLAVSITYLF
201: KTIFFFQAVR REFKHPIRVN FFFAPLISVL FMALGIPHSI TSNLPSMLWY FLMAPVLFLE MKIYGQWMSG GQRRLSKVAN PTNHLAIIGN FAGALLGASM
301: GLEEGPMFFF AVGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTQLC GSFDLGSRFY YFISLFLYFS LVVRINFFRG FKFSLAWWAY
401: TFPMTAVATA TIKYSGEVTG LATQVLSIVM SGAATLMVIG VLVLTVMHAF VKCDLFPNDV AIAISAEQPK QKKWFKQLKN GSFGLKVFEM ASKRILKELK
501: DLQKDPPTSC SAGPVAEDMF HWQATIMGPS DSPYSGGVFL VTIHFPPDYP FKPPKVAFRT KVFHPNINSN GSICLDILKE QWSPALTISK VLLSICSLLT
601: DPNPDDPLVP EIAHMYKTDK NKYESTARTW TQKYGMG

Best Arabidopsis Sequence Match ( AT4G27970.6 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.