Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89215 | Canola | plastid | 97.97 | 22.76 |
| CDY19015 | Canola | plastid | 97.97 | 22.76 |
| CDY14262 | Canola | plastid | 99.32 | 22.69 |
| CDX84361 | Canola | plasma membrane | 6.76 | 2.56 |
| CDX97408 | Canola | cytosol, peroxisome, plasma membrane, plastid | 6.76 | 1.99 |
| CDY29871 | Canola | plastid | 5.41 | 1.61 |
| CDX92855 | Canola | plastid | 5.41 | 1.61 |
| GSMUA_Achr1P25300_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 2.7 | 1.05 |
| CDY24881 | Canola | extracellular | 1.35 | 1.04 |
| CDY00627 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 1.35 | 1.04 |
| CDY19522 | Canola | endoplasmic reticulum | 1.35 | 1.01 |
| CDY12933 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 1.35 | 0.99 |
| CDY12936 | Canola | plasma membrane | 2.03 | 0.79 |
| TraesCS3B01G199200.1 | Wheat | plasma membrane | 2.03 | 0.77 |
| CDY03280 | Canola | plasma membrane | 2.03 | 0.77 |
| CDY44267 | Canola | cytosol | 2.7 | 0.65 |
| CDY46973 | Canola | cytosol | 2.7 | 0.65 |
| CDX87147 | Canola | cytosol, nucleus, plasma membrane | 2.7 | 0.64 |
| CDX80404 | Canola | cytosol | 2.7 | 0.63 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 1.35 | 0.55 |
| CDX88065 | Canola | cytosol | 2.7 | 0.54 |
| GSMUA_Achr9P21990_001 | Banana | plasma membrane | 1.35 | 0.53 |
| GSMUA_Achr7P17640_001 | Banana | golgi, plasma membrane, plastid | 1.35 | 0.52 |
| CDY39794 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 1.35 | 0.52 |
| Zm00001d039241_P001 | Maize | golgi, plasma membrane, plastid | 1.35 | 0.51 |
| TraesCS3D01G174800.1 | Wheat | plasma membrane | 1.35 | 0.51 |
| HORVU3Hr1G033800.1 | Barley | plastid | 1.35 | 0.51 |
| Solyc04g080990.1.1 | Tomato | cytosol, golgi, peroxisome | 1.35 | 0.5 |
| Os05t0269200-00 | Rice | cytosol, golgi, plasma membrane | 1.35 | 0.5 |
| TraesCS3A01G167000.1 | Wheat | plasma membrane | 1.35 | 0.5 |
| EER99979 | Sorghum | plastid | 1.35 | 0.48 |
| CDX98059 | Canola | cytosol, peroxisome, plastid | 1.35 | 0.36 |
| CDY30084 | Canola | plasma membrane | 1.35 | 0.34 |
| KRH51762 | Soybean | mitochondrion | 0.68 | 0.32 |
| GSMUA_Achr6P07610_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 0.68 | 0.3 |
| Os01t0247700-01 | Rice | extracellular, plasma membrane | 0.68 | 0.29 |
| Solyc07g051950.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 0.68 | 0.28 |
| Solyc03g031590.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 0.68 | 0.27 |
| VIT_12s0059g00860.t01 | Wine grape | peroxisome, plasma membrane, plastid | 0.68 | 0.26 |
| CDY08628 | Canola | golgi, peroxisome, plasma membrane | 0.68 | 0.26 |
| CDY19523 | Canola | cytosol, extracellular, plasma membrane | 0.0 | 0.0 |
| HORVU2Hr1G118150.1 | Barley | peroxisome | 0.0 | 0.0 |
| VIT_18s0001g13440.t01 | Wine grape | golgi, plasma membrane, vacuole | 0.0 | 0.0 |
| CDY00628 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 0.0 | 0.0 |
| CDY08625 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY12934 | Canola | cytosol, extracellular, plasma membrane | 0.0 | 0.0 |
| KRH61084 | Soybean | golgi, peroxisome, plasma membrane | 0.0 | 0.0 |
| KRH56158 | Soybean | golgi, peroxisome, plasma membrane | 0.0 | 0.0 |
| KRH51125 | Soybean | plasma membrane | 0.0 | 0.0 |
| KRH25357 | Soybean | plasma membrane | 0.0 | 0.0 |
| KRH02037 | Soybean | plasma membrane | 0.0 | 0.0 |
| HORVU5Hr1G066120.1 | Barley | extracellular, plasma membrane | 0.0 | 0.0 |
| HORVU3Hr1G098700.1 | Barley | extracellular, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX97407 | EnsemblPlantsGene:GSBRNA2T00104542001 | Gene3D:3.10.110.10 | GO:A0A078E8N0 | InterPro:IPR000608 | InterPro:IPR016135 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | MetaCyc:PWY-7511 | PANTHER:PTHR24068 | PANTHER:PTHR24068:SF78 |
| PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDX97407 | ProteinID:CDX97407.1 | ScanProsite:PS00183 | SMART:SM00212 |
| SUPFAM:SSF54495 | UniParc:UPI0004EF303A | UniPathway:UPA00143 | MapMan:19.2.2.5.2 | : | : |
Description
BnaC08g12720DSUMO-conjugating enzyme UBC9 [Source:Projected from Arabidopsis thaliana (AT4G27960) UniProtKB/Swiss-Prot;Acc:P35132]
Coordinates
chrLK031899:-:428874..430318
Molecular Weight (calculated)
16493.8 Da
IEP (calculated)
8.068
GRAVY (calculated)
-0.339
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKRILKEL KDLQKDPPTS CSAGPAAEDV FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD KNKYESTART WTQKYAMG
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD KNKYESTART WTQKYAMG
001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD KNKYESTART WTQKYAMG
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD KNKYESTART WTQKYAMG
Arabidopsis Description
UBC9Ubiquitin conjugating enzyme 9 [Source:UniProtKB/TrEMBL;Acc:F4JKF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.