Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G174800.1 | Wheat | plasma membrane | 97.19 | 97.69 |
| HORVU3Hr1G033800.1 | Barley | plastid | 96.68 | 95.7 |
| TraesCS3A01G167000.1 | Wheat | plasma membrane | 96.42 | 93.55 |
| Zm00001d039241_P001 | Maize | golgi, plasma membrane, plastid | 75.96 | 76.35 |
| GSMUA_Achr6P07610_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 64.19 | 74.26 |
| Os01t0247700-01 | Rice | extracellular, plasma membrane | 65.22 | 73.49 |
| EER99979 | Sorghum | plastid | 75.7 | 70.48 |
| HORVU5Hr1G066120.1 | Barley | extracellular, plasma membrane | 47.57 | 68.13 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 61.38 | 66.48 |
| GSMUA_Achr1P25300_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 63.17 | 64.83 |
| GSMUA_Achr9P21990_001 | Banana | plasma membrane | 61.38 | 63.49 |
| GSMUA_Achr7P17640_001 | Banana | golgi, plasma membrane, plastid | 61.38 | 62.5 |
| HORVU2Hr1G118150.1 | Barley | peroxisome | 45.78 | 59.87 |
| Solyc07g051950.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 53.71 | 58.82 |
| KRH51762 | Soybean | mitochondrion | 47.06 | 58.6 |
| CDY00627 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 28.13 | 56.99 |
| VIT_12s0059g00860.t01 | Wine grape | peroxisome, plasma membrane, plastid | 55.75 | 56.48 |
| HORVU3Hr1G098700.1 | Barley | extracellular, plasma membrane | 47.31 | 56.06 |
| KRH61084 | Soybean | golgi, peroxisome, plasma membrane | 54.22 | 54.78 |
| CDY19522 | Canola | endoplasmic reticulum | 27.88 | 54.77 |
| Bra036662.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 33.76 | 54.1 |
| KRH56158 | Soybean | golgi, peroxisome, plasma membrane | 50.9 | 53.78 |
| CDY12933 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 27.88 | 53.69 |
| Solyc03g031590.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 50.38 | 52.81 |
| VIT_18s0001g13440.t01 | Wine grape | golgi, plasma membrane, vacuole | 42.2 | 52.72 |
| Solyc04g080990.1.1 | Tomato | cytosol, golgi, peroxisome | 52.69 | 51.76 |
| KRH25357 | Soybean | plasma membrane | 39.39 | 51.51 |
| AT1G62262.1 | Thale cress | plasma membrane | 47.06 | 50.41 |
| CDY12936 | Canola | plasma membrane | 48.85 | 50.13 |
| Bra027058.1-P | Field mustard | plasma membrane | 48.85 | 50.13 |
| AT1G62280.1 | Thale cress | plasma membrane | 49.1 | 49.87 |
| CDY39794 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 48.85 | 49.35 |
| Bra034473.1-P | Field mustard | extracellular, golgi, plasma membrane | 23.27 | 49.19 |
| CDY08628 | Canola | golgi, peroxisome, plasma membrane | 47.57 | 48.06 |
| KRH02037 | Soybean | plasma membrane | 45.52 | 47.72 |
| CDY03280 | Canola | plasma membrane | 47.83 | 47.7 |
| KRH51125 | Soybean | plasma membrane | 45.52 | 47.47 |
| CDY24881 | Canola | extracellular | 22.76 | 46.35 |
| CDY00628 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 9.46 | 45.12 |
| Bra034474.1-P | Field mustard | peroxisome | 24.3 | 43.58 |
| CDY19523 | Canola | cytosol, extracellular, plasma membrane | 11.76 | 36.22 |
| CDY12934 | Canola | cytosol, extracellular, plasma membrane | 12.02 | 34.31 |
| TraesCS1B01G388600.1 | Wheat | plasma membrane | 31.71 | 33.24 |
| CDY08625 | Canola | plasma membrane | 15.35 | 29.85 |
| TraesCS1B01G455100.1 | Wheat | plasma membrane | 38.11 | 27.8 |
| TraesCS3B01G018300.1 | Wheat | mitochondrion | 38.36 | 27.42 |
| TraesCS1B01G456100.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.64 | 25.92 |
| TraesCS1B01G456300.1 | Wheat | plasma membrane | 39.39 | 24.88 |
| TraesCS1B01G456400.1 | Wheat | plasma membrane | 38.11 | 24.75 |
| TraesCS1B01G456200.1 | Wheat | plasma membrane | 39.64 | 24.68 |
| TraesCS1B01G456500.1 | Wheat | plasma membrane | 37.6 | 24.42 |
| TraesCS3B01G254700.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.34 | 23.59 |
| TraesCS3B01G178600.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.06 | 23.42 |
| TraesCS2B01G416100.1 | Wheat | plastid | 34.27 | 23.1 |
| TraesCS1B01G147400.1 | Wheat | plasma membrane | 35.29 | 21.73 |
| TraesCS1B01G456000.1 | Wheat | cytosol, peroxisome, plasma membrane | 31.46 | 21.28 |
| CDX97407 | Canola | cytosol | 0.77 | 2.03 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G199200.1 | EnsemblPlantsGene:TraesCS3B01G199200 | Gene3D:1.50.10.150 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR038665 | InterPro:Voltage-dep_anion_channel | InterPro:Voltage-dep_anion_channel_sf |
| PANTHER:PTHR31269 | PANTHER:PTHR31269:SF4 | PFAM:PF03595 | SEG:seg | TIGR:cd09323 | TMHMM:TMhelix |
| MapMan:24.3.10 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:227664161..227665989
Molecular Weight (calculated)
43138.6 Da
IEP (calculated)
10.329
GRAVY (calculated)
0.585
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: METSSDSLKP CVSQPLGPKG AGLAEAGDGG TMLKASTAPS KPPRLVASRF AMLTRFHAGY FRISLALSGQ ALLWRTLSDR SMDPSALHPL VQSLPSAAFV
101: LLWSLALLTL FALCVLYVAR CVLRLPAVRA EFRHHVGMNY LFAPWISWLL LLQATPFLRP DAPSYHMLWW AFSLPILVLD VKVYGQWFTR GRKFLSMVAN
201: PASHMTVIAN LMTARAAAKM GWHEGAVAMF AVGAAHYLVL FVTLYQRFLG SDSLPAMLRP VFFLFFAAPS MASLAWCSIS MSFDTGCKML FFLSLFLFAS
301: LVSRPTLFKR AMRRFSVAWW AYSFPLTLLA LASAEYAQEV REPAASVLML ALAVLSVLVT LALMVFTALR PNDLLPHDDP FFAGTLPPRA S
101: LLWSLALLTL FALCVLYVAR CVLRLPAVRA EFRHHVGMNY LFAPWISWLL LLQATPFLRP DAPSYHMLWW AFSLPILVLD VKVYGQWFTR GRKFLSMVAN
201: PASHMTVIAN LMTARAAAKM GWHEGAVAMF AVGAAHYLVL FVTLYQRFLG SDSLPAMLRP VFFLFFAAPS MASLAWCSIS MSFDTGCKML FFLSLFLFAS
301: LVSRPTLFKR AMRRFSVAWW AYSFPLTLLA LASAEYAQEV REPAASVLML ALAVLSVLVT LALMVFTALR PNDLLPHDDP FFAGTLPPRA S
001: MEIPRQEIHI EIDNSIPSSK EFKTGLADAK PVVLMSALRS LHAGYFRISL SLCSQALLWK IMIAPESPSM SHMHSKLPSM AFHLLWYLAL VTQVSLCFLY
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN
Arabidopsis Description
SLAH1SLAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8P4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.