Factsheet for HORVU3Hr1G033800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G174800.1	Wheat	plasma membrane	95.44	96.92
TraesCS3B01G199200.1	Wheat	plasma membrane	95.7	96.68
TraesCS3A01G167000.1	Wheat	plasma membrane	96.46	94.54
Zm00001d039241_P001	Maize	golgi, plasma membrane, plastid	74.68	75.84
GSMUA_Achr6P07610_001	Banana	golgi, mitochondrion, plasma membrane, plastid	63.8	74.56
Os01t0247700-01	Rice	extracellular, plasma membrane	64.81	73.78
EER99979	Sorghum	plastid	73.92	69.52
HORVU5Hr1G066120.1	Barley	extracellular, plasma membrane	46.84	67.77
GSMUA_Achr10P...	Banana	endoplasmic reticulum	61.27	67.04
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	63.04	65.35
GSMUA_Achr9P21990_001	Banana	plasma membrane	61.01	63.76
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	60.76	62.5
HORVU2Hr1G118150.1	Barley	peroxisome	45.06	59.53
KRH51762	Soybean	mitochondrion	46.58	58.6
Solyc07g051950.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	52.91	58.54
CDY00627	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.85	56.99
VIT_12s0059g00860.t01	Wine grape	peroxisome, plasma membrane, plastid	54.68	55.96
HORVU3Hr1G098700.1	Barley	extracellular, plasma membrane	46.58	55.76
KRH61084	Soybean	golgi, peroxisome, plasma membrane	53.67	54.78
CDY19522	Canola	endoplasmic reticulum	27.59	54.77
Bra036662.1-P	Field mustard	endoplasmic reticulum, plasma membrane	33.42	54.1
KRH56158	Soybean	golgi, peroxisome, plasma membrane	50.38	53.78
CDY12933	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.59	53.69
Solyc03g031590.2.1	Tomato	cytosol, peroxisome, plasma membrane	50.13	53.08
VIT_18s0001g13440.t01	Wine grape	golgi, plasma membrane, vacuole	42.03	53.04
KRH25357	Soybean	plasma membrane	38.99	51.51
Solyc04g080990.1.1	Tomato	cytosol, golgi, peroxisome	51.65	51.26
AT1G62262.1	Thale cress	plasma membrane	46.58	50.41
AT1G62280.1	Thale cress	plasma membrane	48.35	49.61
Bra027058.1-P	Field mustard	plasma membrane	47.85	49.61
CDY12936	Canola	plasma membrane	47.85	49.61
CDY39794	Canola	endoplasmic reticulum, nucleus, plasma membrane	48.35	49.35
Bra034473.1-P	Field mustard	extracellular, golgi, plasma membrane	23.04	49.19
CDY08628	Canola	golgi, peroxisome, plasma membrane	46.84	47.8
KRH02037	Soybean	plasma membrane	45.06	47.72
CDY03280	Canola	plasma membrane	47.34	47.7
KRH51125	Soybean	plasma membrane	45.06	47.47
CDY24881	Canola	extracellular	22.53	46.35
CDY00628	Canola	endoplasmic reticulum, extracellular, plasma membrane	9.37	45.12
Bra034474.1-P	Field mustard	peroxisome	23.8	43.12
HORVU7Hr1G076200.1	Barley	plastid	18.99	40.98
HORVU2Hr1G094480.1	Barley	endoplasmic reticulum, extracellular	9.37	39.36
HORVU5Hr1G055480.1	Barley	golgi	25.57	37.97
HORVU3Hr1G005540.1	Barley	golgi, plasma membrane	35.44	37.43
CDY19523	Canola	cytosol, extracellular, plasma membrane	11.39	35.43
CDY12934	Canola	cytosol, extracellular, plasma membrane	11.65	33.58
CDY08625	Canola	plasma membrane	15.19	29.85
HORVU3Hr1G030850.3	Barley	cytosol	22.28	25.88
HORVU1Hr1G092740.1	Barley	mitochondrion, peroxisome, plasma membrane	38.48	25.12
HORVU1Hr1G092640.3	Barley	mitochondrion	38.48	23.1
HORVU1Hr1G092660.2	Barley	plastid	36.71	22.04
HORVU3Hr1G030840.1	Barley	cytosol	27.59	21.41
CDX97407	Canola	cytosol	0.51	1.35

Protein Annotations

EnsemblPlants:HORVU3Hr1G033800.1	EnsemblPlantsGene:HORVU3Hr1G033800	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF4	PFAM:PF03595	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B4756A3
UniProt:A0A287KQ36	MapMan:24.3.10	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:180892999..180895186

Molecular Weight (calculated)

43673.2 Da

IEP (calculated)

10.540

GRAVY (calculated)

0.562

Length

395 amino acids

Sequence
(BLAST)

001: LHRSITMETI SSSLKPCASQ PLSPKGAGLA EAGDGGTMLK ASTAPNKPPR PVASRFAMLT RFHAGYFRIS LALSGQALLW RTLSDRSTDP SALHPLVQSL
101: PSAAFVLLWS LALLTLFALC VLYVARCVLR LPAVRAEFRH HVGMNYLFAP WISWLLLLQA TPFLRPDAPS YHMLWWGFSL PILVLDVKVY GQWFTRGRKF
201: LSMVANPASH MTVIANLMTA RAAAKMGWHE GAVAMFAVGA AHYLVLFVTL YQRFLGSDSL PAMLRPVFFL FFAAPSMASL AWCSISMSFD TGCKMLFFLS
301: LFLFASLVSR PTLFKRAMRR FSVAWWAYSF PLTLLALASA EYAQEVREPA ASVLMLALAV LSVLVTLALM VFTALRPNDL LPHDDPFFTA TLPAR

Best Arabidopsis Sequence Match ( AT1G62280.1 )
(BLAST)

001: MEIPRQEIHI EIDNSIPSSK EFKTGLADAK PVVLMSALRS LHAGYFRISL SLCSQALLWK IMIAPESPSM SHMHSKLPSM AFHLLWYLAL VTQVSLCFLY
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN

Arabidopsis Description

SLAH1SLAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8P4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.