Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G398000.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 100.0 | 16.35 |
| TraesCS2B01G416100.1 | Wheat | plastid | 100.0 | 16.21 |
| TraesCS2D01G395700.1 | Wheat | plastid | 100.0 | 16.07 |
| GSMUA_Achr8P12070_001 | Banana | cytosol | 76.6 | 14.43 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 78.72 | 13.7 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus, plastid | 82.98 | 13.38 |
| OQU82188 | Sorghum | plastid | 92.55 | 13.32 |
| GSMUA_Achr5P20180_001 | Banana | cytosol | 79.79 | 13.2 |
| VIT_02s0025g04930.t01 | Wine grape | cytosol, nucleus, plasma membrane, plastid | 71.28 | 12.79 |
| HORVU3Hr1G005540.1 | Barley | golgi, plasma membrane | 48.94 | 12.3 |
| Bra019770.1-P | Field mustard | cytosol, peroxisome, plastid | 72.34 | 12.25 |
| AT1G12480.1 | Thale cress | cytosol, nucleus, plasma membrane | 72.34 | 12.23 |
| CDY30084 | Canola | plasma membrane | 75.53 | 12.12 |
| CDX98059 | Canola | cytosol, peroxisome, plastid | 71.28 | 12.07 |
| Solyc08g079770.2.1 | Tomato | cytosol, peroxisome, plastid | 70.21 | 11.89 |
| PGSC0003DMT400009999 | Potato | cytosol | 69.15 | 11.61 |
| HORVU3Hr1G033800.1 | Barley | plastid | 39.36 | 9.37 |
| HORVU3Hr1G030840.1 | Barley | cytosol | 47.87 | 8.84 |
| Zm00001d002603_P001 | Maize | nucleus | 91.49 | 8.11 |
| HORVU1Hr1G092740.1 | Barley | mitochondrion, peroxisome, plasma membrane | 51.06 | 7.93 |
| HORVU5Hr1G055480.1 | Barley | golgi | 22.34 | 7.89 |
| HORVU1Hr1G092660.2 | Barley | plastid | 51.06 | 7.29 |
| HORVU1Hr1G092640.3 | Barley | mitochondrion | 50.0 | 7.14 |
| HORVU7Hr1G076200.1 | Barley | plastid | 5.32 | 2.73 |
| HORVU3Hr1G098700.1 | Barley | extracellular, plasma membrane | 4.26 | 1.21 |
| HORVU2Hr1G118150.1 | Barley | peroxisome | 3.19 | 1.0 |
| HORVU5Hr1G066120.1 | Barley | extracellular, plasma membrane | 0.0 | 0.0 |
| HORVU3Hr1G030850.3 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.50.10.150 | MapMan:35.1 | UniProt:A0A287J096 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006873 | GO:GO:0008150 | GO:GO:0008308 | GO:GO:0009987 |
| GO:GO:0015698 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0055085 | EnsemblPlantsGene:HORVU2Hr1G094480 |
| EnsemblPlants:HORVU2Hr1G094480.1 | InterPro:IPR038665 | PFAM:PF03595 | PANTHER:PTHR31269 | PANTHER:PTHR31269:SF11 | InterPro:SLAC/SLAH |
| TMHMM:TMhelix | UniParc:UPI000B46358F | InterPro:Voltage-dep_anion_channel | InterPro:Voltage-dep_anion_channel_sf | SEG:seg | : |
Description
No Description!
Coordinates
chrchr2H:+:664928686..664929039
Molecular Weight (calculated)
10752.3 Da
IEP (calculated)
10.412
GRAVY (calculated)
0.860
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: GSFDAVARTF FFMALFLYMS LVVRINFFRG FRFSIAWWSY TFPMTTASLA TVKYAEAVPC FTSRALALSL SLMSTTMVSL LLVSTLLHAF YWRS
001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH
Arabidopsis Description
SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.