Factsheet for VIT_02s0025g04930.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
plasma membrane 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G094480.1	Barley	endoplasmic reticulum, extracellular	12.79	71.28
AT1G12480.1	Thale cress	cytosol, nucleus, plasma membrane	74.81	70.5
Bra019770.1-P	Field mustard	cytosol, peroxisome, plastid	73.86	69.73
CDX98059	Canola	cytosol, peroxisome, plastid	73.66	69.55
Solyc08g079770.2.1	Tomato	cytosol, peroxisome, plastid	71.56	67.57
GSMUA_Achr8P12070_001	Banana	cytosol	64.12	67.33
PGSC0003DMT400009999	Potato	cytosol	71.18	66.61
CDY30084	Canola	plasma membrane	73.86	66.04
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	70.42	63.29
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	64.89	62.96
GSMUA_Achr5P20180_001	Banana	cytosol	66.22	61.09
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	65.27	59.48
TraesCS2B01G416100.1	Wheat	plastid	65.27	58.97
TraesCS2D01G395700.1	Wheat	plastid	65.27	58.46
OQU82188	Sorghum	plastid	66.03	52.99
VIT_12s0059g00860.t01	Wine grape	peroxisome, plasma membrane, plastid	30.34	41.19
VIT_18s0001g13440.t01	Wine grape	golgi, plasma membrane, vacuole	23.47	39.3
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	45.23	37.8
Zm00001d002603_P001	Maize	nucleus	65.84	32.55

Protein Annotations

Gene3D:1.50.10.150	EntrezGene:100244459	wikigene:100244459	MapMan:24.3.10	ProteinID:CBI34796	ProteinID:CBI34796.3
UniProt:D7TWC1	EMBL:FN596251	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006820	GO:GO:0006873
GO:GO:0006950	GO:GO:0008150	GO:GO:0008308	GO:GO:0008509	GO:GO:0009270	GO:GO:0009628
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0010037	GO:GO:0010118	GO:GO:0010193
GO:GO:0015698	GO:GO:0015711	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0019901
GO:GO:0019903	GO:GO:0050891	GO:GO:0055085	GO:GO:0090332	GO:GO:0098656	GO:GO:1902456
InterPro:IPR038665	EntrezGene:LOC100244459	wikigene:LOC100244459	PFAM:PF03595	PANTHER:PTHR31269	PANTHER:PTHR31269:SF11
InterPro:SLAC/SLAH	TMHMM:TMhelix	UniParc:UPI0001BE43FE	ArrayExpress:VIT_02s0025g04930	EnsemblPlantsGene:VIT_02s0025g04930	EnsemblPlants:VIT_02s0025g04930.t01
InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf	RefSeq:XP_002275215	RefSeq:XP_002275215.1	SEG:seg	:

Description

No Description!

Coordinates

chr2:+:4431530..4434322

Molecular Weight (calculated)

59350.3 Da

IEP (calculated)

10.355

GRAVY (calculated)

0.091

Length

524 amino acids

Sequence
(BLAST)

001: MADKGEKPPK RPNKFRDMKR SQRNFSRQVS LETGFSVLNR ESKAKDERRV LRRSGRSFGG FGATNRVGGD GRKGDFSIFM TKSALTKQNS SLPLRRESEL
101: DFQKNDGSGV DDSVPAGRYF AALRGPELDQ VKESEDILLP KDEQWPFLLR FPIGCFGICL GLSSQAVLWR ALATSPATKF LHVTPFINLA LWFLALAVLL
201: SVSFIYILKC VFYFEAVKRE YFHPVRVNFF FAPWVVCMFL ALSLPSILAP KTLHPAIWCI FMAPYFFLEL KIYGQWLSGG KRRLCKVANP SSHLSVVGNF
301: VGAILASKVG WQEAAKFLWA VGFAHYLVVF VTLYQRLPTS EALPKELHPV YSMFIAAPSA ASIAWETIYG DFDGLSRTCY FIALFLYISL VVRINFFRGF
401: RFSVAWWSYT FPMTTVSVAT IKYAEQVPSV LSKGLAVFLS FMSSTMVSVL FVSTLLHAFV WHTLFPNDLA IAITKRKHGR DKKPFKKAYD IRRWTKQSPL
501: SFVSAMTKIN SADKGLDEQK EAEH

Best Arabidopsis Sequence Match ( AT1G12480.1 )
(BLAST)

001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH

Arabidopsis Description

SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.