Factsheet for TraesCS2A01G398000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 2
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G094480.1	Barley	endoplasmic reticulum, extracellular	16.35	100.0
TraesCS2B01G416100.1	Wheat	plastid	98.96	98.1
TraesCS2D01G395700.1	Wheat	plastid	98.78	97.09
OQU82188	Sorghum	plastid	85.39	75.19
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	68.87	67.92
GSMUA_Achr8P12070_001	Banana	cytosol	58.78	67.74
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	62.43	66.48
GSMUA_Achr5P20180_001	Banana	cytosol	65.39	66.2
VIT_02s0025g04930.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	59.48	65.27
Solyc08g079770.2.1	Tomato	cytosol, peroxisome, plastid	59.13	61.26
PGSC0003DMT400009999	Potato	cytosol	59.13	60.71
AT1G12480.1	Thale cress	cytosol, nucleus, plasma membrane	58.43	60.43
Bra019770.1-P	Field mustard	cytosol, peroxisome, plastid	57.91	60.0
CDX98059	Canola	cytosol, peroxisome, plastid	57.57	59.64
CDY30084	Canola	plasma membrane	58.26	57.17
Zm00001d002603_P001	Maize	nucleus	83.48	45.28
TraesCS1A01G423900.1	Wheat	plasma membrane	37.91	43.25
TraesCS3A01G028100.1	Wheat	cytosol, peroxisome, plasma membrane	38.43	41.54
TraesCS1A01G423000.1	Wheat	cytosol, peroxisome, plasma membrane	38.09	40.56
TraesCS1A01G424400.1	Wheat	plasma membrane, plastid	39.3	39.51
TraesCS1A01G424500.1	Wheat	plasma membrane	38.96	37.52
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	38.61	36.63
TraesCS3A01G225100.1	Wheat	plasma membrane	42.09	35.54
TraesCS1A01G127500.1	Wheat	plasma membrane	39.3	34.61
TraesCS3A01G167000.1	Wheat	plasma membrane	22.96	32.75

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006820	GO:GO:0006873
GO:GO:0006950	GO:GO:0008150	GO:GO:0008308	GO:GO:0008509	GO:GO:0009270	GO:GO:0009628
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0010037	GO:GO:0010118	GO:GO:0010193
GO:GO:0015698	GO:GO:0015711	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0019901
GO:GO:0019903	GO:GO:0050891	GO:GO:0055085	GO:GO:0090332	GO:GO:1902456	InterPro:IPR038665
PFAM:PF03595	PANTHER:PTHR31269	PANTHER:PTHR31269:SF11	InterPro:SLAC/SLAH	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G398000
EnsemblPlants:TraesCS2A01G398000.1	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf	TIGR:cd09323	SEG:seg	:

Description

No Description!

Coordinates

chr2A:-:651608299..651610191

Molecular Weight (calculated)

62805.3 Da

IEP (calculated)

10.406

GRAVY (calculated)

0.107

Length

575 amino acids

Sequence
(BLAST)

001: MSGAEPSAAG NGQHAAVDIR AAAAQHEEPR QTSMSGPLNL RSDRRPPPAQ RAFSRQVSLG SGVTVMGMDR GGRNGGRPGQ RALPRSGKSL GVLNHSGGLG
101: PDGAPRRGGD FSMFRTKSTL SKQNSMLPSR IKEELDGVDL DRVEGQPAGR PADVDPLNKS VPAGRYFAAL RGPELDEVRD YEDILLPKDE VWPFLLRFPI
201: GCFGVCLGLG SQAILWGALA ASPAMGFLRV TPMINVAVWL LATAVLVATS VTYALKCVFY FEAIRREFFH PVRVNFFFTP SIAAMFLAIG LPRAFAPARL
301: HPAVWCAFVA PLFALELKIY GQWLSGGKRR LCKVANPSSH LSVVGNFVGA ILAARVGWEE AGKFLWAIGV SHYIVVFVTL YQRLPTNEAL PMELHPVYSM
401: FIATPSAASL AWAAIYGSFD AVARTFFFMA LFLYMSLVVR INFFRGFRFS IAWWSYTFPM TTASLATVKY AEAVPCFTSR ALALSLSLMS TTMVSLLLVS
501: TLLHAFYWRS LFPNDLAIAI TKDRQSGAGR PHGKGRKAGK RVNDIKRWAK QVPLSVVSSI TKSNSADKEE EEKTD

Best Arabidopsis Sequence Match ( AT1G12480.1 )
(BLAST)

001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH

Arabidopsis Description

SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.