Factsheet for TraesCS3A01G225100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 3
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G228400.1	Wheat	cytosol, nucleus, plasma membrane	88.55	96.02
TraesCS3B01G254700.1	Wheat	cytosol, peroxisome, plasma membrane	86.64	95.31
Os01t0623200-01	Rice	cytosol, peroxisome, plasma membrane	72.25	74.77
Zm00001d044181_P001	Maize	plasma membrane	69.16	74.76
Zm00001d011393_P001	Maize	cytosol, peroxisome, plasma membrane	68.58	73.66
GSMUA_Achr9P05400_001	Banana	plastid	44.05	67.26
TraesCS1A01G423900.1	Wheat	plasma membrane	47.14	63.69
TraesCS1A01G423000.1	Wheat	cytosol, peroxisome, plasma membrane	50.07	63.15
OQU87187	Sorghum	plasma membrane	73.57	62.24
CDX84361	Canola	plasma membrane	34.8	60.77
TraesCS3A01G028100.1	Wheat	cytosol, peroxisome, plasma membrane	47.28	60.53
TraesCS1A01G424500.1	Wheat	plasma membrane	51.98	59.3
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	51.1	58.19
KRH38307	Soybean	golgi, plasma membrane, plastid	34.95	57.49
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	42.88	57.37
TraesCS1A01G424400.1	Wheat	plasma membrane, plastid	47.43	56.47
CDY29871	Canola	plastid	40.97	56.14
Bra040840.1-P	Field mustard	plastid	40.97	56.14
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	45.67	56.04
CDX92855	Canola	plastid	40.68	55.62
KRH38311	Soybean	cytosol, nucleus, plasma membrane	47.72	54.44
KRH08776	Soybean	cytosol, nucleus, plasma membrane	47.72	54.44
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	46.11	53.86
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	39.5	53.59
AT4G27970.6	Thale cress	plastid	40.82	53.56
Solyc09g014610.2.1	Tomato	plasma membrane	46.11	52.86
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	48.46	52.63
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	47.14	52.11
Bra026471.1-P	Field mustard	cytosol, plastid	42.0	51.35
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	45.67	50.41
KRH08775	Soybean	cytosol, nucleus, plasma membrane	43.17	50.34
PGSC0003DMT400074359	Potato	plasma membrane	44.05	50.17
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	43.91	49.34
KRH35219	Soybean	cytosol	39.65	48.13
TraesCS1A01G127500.1	Wheat	plasma membrane	45.52	47.47
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	43.91	47.09
CDX87147	Canola	cytosol, nucleus, plasma membrane	43.02	47.03
CDX80404	Canola	cytosol	43.61	46.7
Bra009724.1-P	Field mustard	cytosol	43.47	46.54
Bra029390.1-P	Field mustard	cytosol	42.88	45.62
CDY46973	Canola	cytosol	40.09	44.17
CDY44267	Canola	cytosol	39.79	44.14
CDY19015	Canola	plastid	40.82	43.64
Bra026294.1-P	Field mustard	plastid	40.68	43.42
CDX89215	Canola	plastid	40.38	43.17
Bra010388.1-P	Field mustard	plastid	40.53	42.59
CDY14262	Canola	plastid	40.23	42.28
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	35.54	42.09
CDX88065	Canola	cytosol	43.61	39.87
TraesCS3A01G167000.1	Wheat	plasma membrane	21.0	35.48

Protein Annotations

EnsemblPlants:TraesCS3A01G225100.1	EnsemblPlantsGene:TraesCS3A01G225100	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF12	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:421719543..421722510

Molecular Weight (calculated)

75268.1 Da

IEP (calculated)

9.873

GRAVY (calculated)

0.111

Length

681 amino acids

Sequence
(BLAST)

001: MSKRSVSTRV SWPGQTTSPD SKGHLFEAAL LAWTLVRIIF IRSTHAYLPL AVAGKQKGFS IGMELGNKDV QIQMASQLSE QSSREDLPSL LIQVPSRTIA
101: GFDCVGRDAV TPAALNEQNS KDTVISIQAP ATPPLVAPVR AYDDTQIPYS LSLSMPASPS GLHFSQFRAA SVRRNEAHAA AAPSDTKQVE VQSPRLLQQT
201: RFHSQPILHA SQINDGARRA EGTRDKRFDP FKTFSGRLER QLSNLRGRPL DPMDLGSHHS KISEETDQVP GTDRYFDALE GPELDTLRAT EVAVLPNDEQ
301: WPFLLRFPIS AFGMVLGVSS QAILWKTLAT APPTVFLHVS LAVAHALWYI SLALMGLVSC IYLLKIVFYF EAVRREFHHP IRANFFFAPW IACLFLVQGA
401: PRELAQVHHG VWYMLMAPIF CLELKIYGQW MSGGQRRLSK VANPSNHLSI VGNFVGALLG AKMGIREGPI FFFAVGLAHY IVLFVTLYQR LPTNVTLPKE
501: LHPVFFLFVA APSVASMAWA KINGEFDNGA RIAYFIALFL YMSLAVRINF FRGFRFSLAW WAYTFPMTGA SIATITYATE VTNVLTRTLS IGLSGIATVT
601: VAGLLVTTMF HAFVLRDLFP NDVSIAITRR KPKFSKILAH FRSSSSDMKE LVLSVSKSPN ADSDSSVTET DPSVSKGKAE P

Best Arabidopsis Sequence Match ( AT4G27970.6 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.