Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra009724.1-P | Field mustard | cytosol | 84.97 | 99.53 |
CDX80404 | Canola | cytosol | 84.97 | 99.53 |
CDX87147 | Canola | cytosol, nucleus, plasma membrane | 74.77 | 89.41 |
AT5G24030.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 71.95 | 84.41 |
CDY44267 | Canola | cytosol | 65.64 | 79.64 |
CDY46973 | Canola | cytosol | 65.91 | 79.45 |
HORVU5Hr1G055480.1 | Barley | golgi | 25.37 | 71.05 |
Zm00001d010430_P001 | Maize | plasma membrane | 29.8 | 67.89 |
CDX84361 | Canola | plasma membrane | 33.69 | 64.36 |
GSMUA_Achr5P06840_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 33.56 | 62.19 |
KRH38307 | Soybean | golgi, plasma membrane, plastid | 33.56 | 60.39 |
KRH08776 | Soybean | cytosol, nucleus, plasma membrane | 47.11 | 58.79 |
TraesCS1B01G388600.1 | Wheat | plasma membrane | 29.4 | 58.71 |
KRH38311 | Soybean | cytosol, nucleus, plasma membrane | 46.98 | 58.63 |
PGSC0003DMT400021864 | Potato | cytosol, peroxisome, plastid | 43.36 | 58.2 |
GSMUA_Achr9P05400_001 | Banana | plastid | 34.77 | 58.07 |
PGSC0003DMT400074359 | Potato | plasma membrane | 46.31 | 57.69 |
TraesCSU01G204200.1 | Wheat | plasma membrane | 20.4 | 57.58 |
CDX92855 | Canola | plastid | 38.26 | 57.23 |
CDY29871 | Canola | plastid | 37.72 | 56.54 |
CDX97408 | Canola | cytosol, peroxisome, plasma membrane, plastid | 37.99 | 56.37 |
Solyc03g007770.2.1 | Tomato | cytosol, nucleus, plasma membrane | 43.76 | 55.92 |
Solyc06g036440.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 46.31 | 55.92 |
VIT_16s0050g01860.t01 | Wine grape | cytosol, nucleus, plasma membrane | 46.71 | 55.5 |
KRH08775 | Soybean | cytosol, nucleus, plasma membrane | 42.55 | 54.28 |
Solyc09g014610.2.1 | Tomato | plasma membrane | 43.22 | 54.21 |
PGSC0003DMT400051388 | Potato | cytosol, nucleus, plasma membrane | 44.56 | 53.9 |
GSMUA_Achr4P15620_001 | Banana | cytosol, peroxisome, plasma membrane | 34.9 | 51.08 |
GSMUA_Achr6P31880_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 40.81 | 50.84 |
TraesCS1D01G126500.1 | Wheat | cytosol, peroxisome, plasma membrane | 40.81 | 50.33 |
TraesCS1A01G423900.1 | Wheat | plasma membrane | 33.96 | 50.2 |
TraesCS3B01G178600.1 | Wheat | cytosol, peroxisome, plasma membrane | 40.54 | 50.17 |
Os01t0385400-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 41.74 | 49.76 |
GSMUA_Achr7P14260_001 | Banana | cytosol | 39.73 | 49.66 |
TraesCS3D01G159600.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.87 | 49.25 |
Os05t0219900-01 | Rice | cytosol, peroxisome, plasma membrane, plastid | 41.07 | 49.2 |
TraesCS3A01G151400.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.73 | 48.84 |
OQU77636 | Sorghum | cytosol, peroxisome, plasma membrane | 41.07 | 48.73 |
Zm00001d037816_P001 | Maize | plasma membrane | 41.21 | 48.27 |
TraesCS1B01G147400.1 | Wheat | plasma membrane | 41.07 | 48.19 |
TraesCS1B01G455100.1 | Wheat | plasma membrane | 34.63 | 48.13 |
TraesCS1A01G423000.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.77 | 47.96 |
KXG22629 | Sorghum | cytosol, peroxisome, plasma membrane | 33.15 | 47.87 |
TraesCS3B01G254700.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.73 | 47.82 |
TraesCS3A01G028100.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.09 | 47.74 |
TraesCS1D01G432800.1 | Wheat | plasma membrane | 36.78 | 47.24 |
KXG28459 | Sorghum | cytosol, peroxisome, plasma membrane | 33.29 | 47.15 |
Zm00001d009706_P001 | Maize | cytosol, peroxisome, plasma membrane | 32.75 | 47.01 |
Zm00001d041653_P001 | Maize | plastid | 37.85 | 47.0 |
Zm00001d044181_P001 | Maize | plasma membrane | 39.6 | 46.83 |
TraesCS3D01G228400.1 | Wheat | cytosol, nucleus, plasma membrane | 39.33 | 46.66 |
TraesCS1A01G127500.1 | Wheat | plasma membrane | 40.81 | 46.55 |
Zm00001d011393_P001 | Maize | cytosol, peroxisome, plasma membrane | 39.6 | 46.53 |
TraesCS3B01G018300.1 | Wheat | mitochondrion | 33.96 | 46.25 |
Os01t0623200-01 | Rice | cytosol, peroxisome, plasma membrane | 40.67 | 46.05 |
OQU77336 | Sorghum | cytosol | 32.48 | 46.01 |
TraesCSU01G001600.1 | Wheat | plasma membrane | 37.58 | 45.9 |
TraesCS1D01G433100.1 | Wheat | plasma membrane | 36.11 | 45.83 |
TraesCS1B01G456200.1 | Wheat | plasma membrane | 38.26 | 45.38 |
TraesCS1D01G433200.1 | Wheat | plasma membrane | 37.58 | 45.38 |
TraesCS1B01G456100.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.11 | 44.98 |
TraesCS1D01G432700.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.38 | 44.94 |
TraesCS1D01G432900.1 | Wheat | plasma membrane | 37.45 | 44.93 |
TraesCSU01G001400.1 | Wheat | plasma membrane, plastid | 37.85 | 44.9 |
TraesCS1B01G456400.1 | Wheat | plasma membrane | 36.24 | 44.85 |
Zm00001d009705_P001 | Maize | plasma membrane | 34.36 | 44.83 |
TraesCS1A01G424400.1 | Wheat | plasma membrane, plastid | 34.36 | 44.76 |
CDY19015 | Canola | plastid | 38.12 | 44.58 |
TraesCS1A01G424500.1 | Wheat | plasma membrane | 35.7 | 44.56 |
TraesCS1B01G456500.1 | Wheat | plasma membrane | 35.84 | 44.35 |
TraesCS1B01G456300.1 | Wheat | plasma membrane | 36.78 | 44.26 |
Os01t0226600-02 | Rice | endoplasmic reticulum, peroxisome, plasma membrane | 38.93 | 44.21 |
CDX89215 | Canola | plastid | 37.72 | 44.11 |
KXG24404 | Sorghum | cytosol, peroxisome, plasma membrane | 37.99 | 43.94 |
TraesCS3A01G225100.1 | Wheat | plasma membrane | 39.87 | 43.61 |
CDY14262 | Canola | plastid | 37.72 | 43.36 |
TraesCS3D01G017800.1 | Wheat | mitochondrion, plasma membrane | 34.63 | 43.36 |
Os07t0181100-01 | Rice | cytosol, peroxisome, plasma membrane | 36.24 | 43.27 |
EES20021 | Sorghum | plastid | 35.7 | 42.77 |
TraesCS1D01G432500.1 | Wheat | plasma membrane | 35.17 | 42.74 |
Zm00001d039150_P001 | Maize | plasma membrane | 34.5 | 42.69 |
TraesCSU01G001500.1 | Wheat | plasma membrane | 38.52 | 42.64 |
TraesCS1B01G456000.1 | Wheat | cytosol, peroxisome, plasma membrane | 31.68 | 40.83 |
Zm00001d039314_P001 | Maize | plasma membrane | 40.54 | 40.81 |
KXG22628 | Sorghum | plastid | 34.9 | 40.5 |
CDX98059 | Canola | cytosol, peroxisome, plastid | 30.07 | 40.36 |
CDY30084 | Canola | plasma membrane | 30.2 | 38.4 |
KXG31512 | Sorghum | plasma membrane | 39.46 | 36.75 |
CDY19522 | Canola | endoplasmic reticulum | 9.8 | 36.68 |
OQU87187 | Sorghum | plasma membrane | 39.46 | 36.52 |
CDY00627 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 9.4 | 36.27 |
CDY12933 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 9.8 | 35.96 |
CDY12936 | Canola | plasma membrane | 15.84 | 30.97 |
CDY24881 | Canola | extracellular | 7.92 | 30.73 |
CDY39794 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 15.7 | 30.23 |
CDY08628 | Canola | golgi, peroxisome, plasma membrane | 15.3 | 29.46 |
CDY03280 | Canola | plasma membrane | 15.44 | 29.34 |
CDY00628 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 2.82 | 25.61 |
CDY19523 | Canola | cytosol, extracellular, plasma membrane | 3.49 | 20.47 |
CDY12934 | Canola | cytosol, extracellular, plasma membrane | 3.76 | 20.44 |
CDY08625 | Canola | plasma membrane | 4.97 | 18.41 |
CDX97407 | Canola | cytosol | 0.54 | 2.7 |
Protein Annotations
Gene3D:1.50.10.150 | MapMan:24.3.10 | GO:A0A078DFU1 | EnsemblPlants:CDX88065 | ProteinID:CDX88065 | ProteinID:CDX88065.1 |
GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006873 |
GO:GO:0008150 | GO:GO:0008308 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00147481001 | InterPro:IPR038665 | PFAM:PF03595 | PANTHER:PTHR31269 | PANTHER:PTHR31269:SF21 |
InterPro:SLAC/SLAH | TMHMM:TMhelix | UniParc:UPI0004EF2F6F | InterPro:Voltage-dep_anion_channel | InterPro:Voltage-dep_anion_channel_sf | SEG:seg |
Description
BnaA06g26560D
Coordinates
chrLK031854:-:383017..388120
Molecular Weight (calculated)
84989.7 Da
IEP (calculated)
7.743
GRAVY (calculated)
-0.292
Length
745 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRSYCVQI ELEEELPTLL RTATTEEMVG FDNYKDNNLP LPRFISRFHP YHASTTTLNG QEAARSSMEA HRSYIEDLKE TAPWMQINHQ RKPSLSMPTS
101: PNILMISDPT STSSDNNNTV STGKSVKFIS QPMAKVSSLY IGSGNDDDDG RRHDNHHHQQ NQQQSGQLQN QNPGMHKLKD HRYTSFKTWS GKLERQFTRK
201: PAAIEPETPN RPKENINTNE AMPVDRYYDA LEGPELETLR PMAKVSSLYI GSGNDDDDGR RHDNHHHQQN QQQSGQLQNQ NPGMHKLKDH RYTSFKTWSG
301: KLERQFTRKP AAIEPETPNR PKENINTNEA MPVDRYYDAL EGPELETLRP LEEIVLPSEQ TWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV
401: PLWINQALWF ISVALVFTIA IIYLLKIILY FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSVMTELP QFLWCLLMFP FICLELKIYG QWMSGGQRRL
501: SRVANPTNHL SIVGNFVGAL LGASMGLREG PMFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKITGSFDY GSKVCYFIAI
601: FLYFSLAVRI NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVRSTMTQV MCVILCAIAT LVVSALLVTT IIHVFVLGDL FPNDYAIAIS NRPRRKQTSH
701: HRWLDQLRNV SSENIENFLK FTDSDSSQSN DLEAGNGKIQ ENDSA
101: PNILMISDPT STSSDNNNTV STGKSVKFIS QPMAKVSSLY IGSGNDDDDG RRHDNHHHQQ NQQQSGQLQN QNPGMHKLKD HRYTSFKTWS GKLERQFTRK
201: PAAIEPETPN RPKENINTNE AMPVDRYYDA LEGPELETLR PMAKVSSLYI GSGNDDDDGR RHDNHHHQQN QQQSGQLQNQ NPGMHKLKDH RYTSFKTWSG
301: KLERQFTRKP AAIEPETPNR PKENINTNEA MPVDRYYDAL EGPELETLRP LEEIVLPSEQ TWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV
401: PLWINQALWF ISVALVFTIA IIYLLKIILY FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSVMTELP QFLWCLLMFP FICLELKIYG QWMSGGQRRL
501: SRVANPTNHL SIVGNFVGAL LGASMGLREG PMFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKITGSFDY GSKVCYFIAI
601: FLYFSLAVRI NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVRSTMTQV MCVILCAIAT LVVSALLVTT IIHVFVLGDL FPNDYAIAIS NRPRRKQTSH
701: HRWLDQLRNV SSENIENFLK FTDSDSSQSN DLEAGNGKIQ ENDSA
001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS
Arabidopsis Description
SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.