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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009724.1-P Field mustard cytosol 84.97 99.53
CDX80404 Canola cytosol 84.97 99.53
CDX87147 Canola cytosol, nucleus, plasma membrane 74.77 89.41
AT5G24030.1 Thale cress cytosol, endoplasmic reticulum, nucleus 71.95 84.41
CDY44267 Canola cytosol 65.64 79.64
CDY46973 Canola cytosol 65.91 79.45
HORVU5Hr1G055480.1 Barley golgi 25.37 71.05
Zm00001d010430_P001 Maize plasma membrane 29.8 67.89
CDX84361 Canola plasma membrane 33.69 64.36
GSMUA_Achr5P06840_001 Banana cytosol, endoplasmic reticulum, peroxisome 33.56 62.19
KRH38307 Soybean golgi, plasma membrane, plastid 33.56 60.39
KRH08776 Soybean cytosol, nucleus, plasma membrane 47.11 58.79
TraesCS1B01G388600.1 Wheat plasma membrane 29.4 58.71
KRH38311 Soybean cytosol, nucleus, plasma membrane 46.98 58.63
PGSC0003DMT400021864 Potato cytosol, peroxisome, plastid 43.36 58.2
GSMUA_Achr9P05400_001 Banana plastid 34.77 58.07
PGSC0003DMT400074359 Potato plasma membrane 46.31 57.69
TraesCSU01G204200.1 Wheat plasma membrane 20.4 57.58
CDX92855 Canola plastid 38.26 57.23
CDY29871 Canola plastid 37.72 56.54
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 37.99 56.37
Solyc03g007770.2.1 Tomato cytosol, nucleus, plasma membrane 43.76 55.92
Solyc06g036440.1.1 Tomato cytosol, peroxisome, plasma membrane 46.31 55.92
VIT_16s0050g01860.t01 Wine grape cytosol, nucleus, plasma membrane 46.71 55.5
KRH08775 Soybean cytosol, nucleus, plasma membrane 42.55 54.28
Solyc09g014610.2.1 Tomato plasma membrane 43.22 54.21
PGSC0003DMT400051388 Potato cytosol, nucleus, plasma membrane 44.56 53.9
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 34.9 51.08
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 40.81 50.84
TraesCS1D01G126500.1 Wheat cytosol, peroxisome, plasma membrane 40.81 50.33
TraesCS1A01G423900.1 Wheat plasma membrane 33.96 50.2
TraesCS3B01G178600.1 Wheat cytosol, peroxisome, plasma membrane 40.54 50.17
Os01t0385400-01 Rice cytosol, endoplasmic reticulum, plasma membrane 41.74 49.76
GSMUA_Achr7P14260_001 Banana cytosol 39.73 49.66
TraesCS3D01G159600.1 Wheat cytosol, peroxisome, plasma membrane 39.87 49.25
Os05t0219900-01 Rice cytosol, peroxisome, plasma membrane, plastid 41.07 49.2
TraesCS3A01G151400.1 Wheat cytosol, peroxisome, plasma membrane 39.73 48.84
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 41.07 48.73
Zm00001d037816_P001 Maize plasma membrane 41.21 48.27
TraesCS1B01G147400.1 Wheat plasma membrane 41.07 48.19
TraesCS1B01G455100.1 Wheat plasma membrane 34.63 48.13
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 34.77 47.96
KXG22629 Sorghum cytosol, peroxisome, plasma membrane 33.15 47.87
TraesCS3B01G254700.1 Wheat cytosol, peroxisome, plasma membrane 39.73 47.82
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 34.09 47.74
TraesCS1D01G432800.1 Wheat plasma membrane 36.78 47.24
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 33.29 47.15
Zm00001d009706_P001 Maize cytosol, peroxisome, plasma membrane 32.75 47.01
Zm00001d041653_P001 Maize plastid 37.85 47.0
Zm00001d044181_P001 Maize plasma membrane 39.6 46.83
TraesCS3D01G228400.1 Wheat cytosol, nucleus, plasma membrane 39.33 46.66
TraesCS1A01G127500.1 Wheat plasma membrane 40.81 46.55
Zm00001d011393_P001 Maize cytosol, peroxisome, plasma membrane 39.6 46.53
TraesCS3B01G018300.1 Wheat mitochondrion 33.96 46.25
Os01t0623200-01 Rice cytosol, peroxisome, plasma membrane 40.67 46.05
OQU77336 Sorghum cytosol 32.48 46.01
TraesCSU01G001600.1 Wheat plasma membrane 37.58 45.9
TraesCS1D01G433100.1 Wheat plasma membrane 36.11 45.83
TraesCS1B01G456200.1 Wheat plasma membrane 38.26 45.38
TraesCS1D01G433200.1 Wheat plasma membrane 37.58 45.38
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 36.11 44.98
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 36.38 44.94
TraesCS1D01G432900.1 Wheat plasma membrane 37.45 44.93
TraesCSU01G001400.1 Wheat plasma membrane, plastid 37.85 44.9
TraesCS1B01G456400.1 Wheat plasma membrane 36.24 44.85
Zm00001d009705_P001 Maize plasma membrane 34.36 44.83
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 34.36 44.76
CDY19015 Canola plastid 38.12 44.58
TraesCS1A01G424500.1 Wheat plasma membrane 35.7 44.56
TraesCS1B01G456500.1 Wheat plasma membrane 35.84 44.35
TraesCS1B01G456300.1 Wheat plasma membrane 36.78 44.26
Os01t0226600-02 Rice endoplasmic reticulum, peroxisome, plasma membrane 38.93 44.21
CDX89215 Canola plastid 37.72 44.11
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 37.99 43.94
TraesCS3A01G225100.1 Wheat plasma membrane 39.87 43.61
CDY14262 Canola plastid 37.72 43.36
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 34.63 43.36
Os07t0181100-01 Rice cytosol, peroxisome, plasma membrane 36.24 43.27
EES20021 Sorghum plastid 35.7 42.77
TraesCS1D01G432500.1 Wheat plasma membrane 35.17 42.74
Zm00001d039150_P001 Maize plasma membrane 34.5 42.69
TraesCSU01G001500.1 Wheat plasma membrane 38.52 42.64
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 31.68 40.83
Zm00001d039314_P001 Maize plasma membrane 40.54 40.81
KXG22628 Sorghum plastid 34.9 40.5
CDX98059 Canola cytosol, peroxisome, plastid 30.07 40.36
CDY30084 Canola plasma membrane 30.2 38.4
KXG31512 Sorghum plasma membrane 39.46 36.75
CDY19522 Canola endoplasmic reticulum 9.8 36.68
OQU87187 Sorghum plasma membrane 39.46 36.52
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 9.4 36.27
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 9.8 35.96
CDY12936 Canola plasma membrane 15.84 30.97
CDY24881 Canola extracellular 7.92 30.73
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 15.7 30.23
CDY08628 Canola golgi, peroxisome, plasma membrane 15.3 29.46
CDY03280 Canola plasma membrane 15.44 29.34
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 2.82 25.61
CDY19523 Canola cytosol, extracellular, plasma membrane 3.49 20.47
CDY12934 Canola cytosol, extracellular, plasma membrane 3.76 20.44
CDY08625 Canola plasma membrane 4.97 18.41
CDX97407 Canola cytosol 0.54 2.7
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:A0A078DFU1EnsemblPlants:CDX88065ProteinID:CDX88065ProteinID:CDX88065.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0006810GO:GO:0006873
GO:GO:0008150GO:GO:0008308GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0019725
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00147481001InterPro:IPR038665PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF21
InterPro:SLAC/SLAHTMHMM:TMhelixUniParc:UPI0004EF2F6FInterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg
Description
BnaA06g26560D
Coordinates
chrLK031854:-:383017..388120
Molecular Weight (calculated)
84989.7 Da
IEP (calculated)
7.743
GRAVY (calculated)
-0.292
Length
745 amino acids
Sequence
(BLAST)
001: MEGRSYCVQI ELEEELPTLL RTATTEEMVG FDNYKDNNLP LPRFISRFHP YHASTTTLNG QEAARSSMEA HRSYIEDLKE TAPWMQINHQ RKPSLSMPTS
101: PNILMISDPT STSSDNNNTV STGKSVKFIS QPMAKVSSLY IGSGNDDDDG RRHDNHHHQQ NQQQSGQLQN QNPGMHKLKD HRYTSFKTWS GKLERQFTRK
201: PAAIEPETPN RPKENINTNE AMPVDRYYDA LEGPELETLR PMAKVSSLYI GSGNDDDDGR RHDNHHHQQN QQQSGQLQNQ NPGMHKLKDH RYTSFKTWSG
301: KLERQFTRKP AAIEPETPNR PKENINTNEA MPVDRYYDAL EGPELETLRP LEEIVLPSEQ TWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV
401: PLWINQALWF ISVALVFTIA IIYLLKIILY FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSVMTELP QFLWCLLMFP FICLELKIYG QWMSGGQRRL
501: SRVANPTNHL SIVGNFVGAL LGASMGLREG PMFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKITGSFDY GSKVCYFIAI
601: FLYFSLAVRI NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVRSTMTQV MCVILCAIAT LVVSALLVTT IIHVFVLGDL FPNDYAIAIS NRPRRKQTSH
701: HRWLDQLRNV SSENIENFLK FTDSDSSQSN DLEAGNGKIQ ENDSA
Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)
001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS
Arabidopsis Description
SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.