CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010430_P001	Maize	plasma membrane	48.86	78.59
CDX84361	Canola	plasma membrane	42.4	57.18
OQU77636	Sorghum	cytosol, peroxisome, plasma membrane	68.06	57.01
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	43.54	56.97
Zm00001d037816_P001	Maize	plasma membrane	65.59	54.25
Os01t0385400-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	62.55	52.64
KRH38307	Soybean	golgi, plasma membrane, plastid	40.3	51.21
CDX92855	Canola	plastid	45.82	48.39
Bra040840.1-P	Field mustard	plastid	45.25	47.89
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	45.63	47.81
CDY29871	Canola	plastid	45.06	47.69
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	52.66	47.51
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	49.81	47.21
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	45.06	45.93
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	56.08	45.81
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	52.47	44.81
PGSC0003DMT400074359	Potato	plasma membrane	50.76	44.65
AT4G27970.6	Thale cress	plastid	43.92	44.51
Bra026471.1-P	Field mustard	cytosol, plastid	46.96	44.34
KRH08776	Soybean	cytosol, nucleus, plasma membrane	50.0	44.05
KRH38311	Soybean	cytosol, nucleus, plasma membrane	49.81	43.89
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	52.28	43.86
Solyc09g014610.2.1	Tomato	plasma membrane	49.43	43.77
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	50.57	43.11
KRH08775	Soybean	cytosol, nucleus, plasma membrane	47.15	42.47
GSMUA_Achr7P14260_001	Banana	cytosol	47.91	42.28
OQU77336	Sorghum	cytosol	42.02	42.02
KRH35219	Soybean	cytosol	44.68	41.89
CDX87147	Canola	cytosol, nucleus, plasma membrane	47.72	40.29
EES20021	Sorghum	plastid	46.2	39.07
CDX80404	Canola	cytosol	47.15	38.99
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	46.96	38.9
Bra009724.1-P	Field mustard	cytosol	46.96	38.84
Bra029390.1-P	Field mustard	cytosol	46.96	38.59
KXG22628	Sorghum	plastid	46.58	38.16
CDY44267	Canola	cytosol	43.54	37.3
CDY46973	Canola	cytosol	43.54	37.05
CDY19015	Canola	plastid	44.87	37.05
CDX89215	Canola	plastid	44.87	37.05
Bra026294.1-P	Field mustard	plastid	44.87	36.99
KXG31512	Sorghum	plasma membrane	55.51	36.5
CDY14262	Canola	plastid	44.87	36.42
Bra010388.1-P	Field mustard	plastid	44.87	36.42
EER99979	Sorghum	plastid	26.81	33.57
OQU87187	Sorghum	plasma membrane	51.33	33.54
CDX88065	Canola	cytosol	47.15	33.29
OQU82188	Sorghum	plastid	38.02	30.63

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	UniProt:A0A1B6PS10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0006810	GO:GO:0006873	GO:GO:0008150	GO:GO:0008308	GO:GO:0009987
GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0055085	GO:GO:0098656
InterPro:IPR038665	EnsemblPlants:KXG28459	ProteinID:KXG28459	ProteinID:KXG28459.1	PFAM:PF03595	PANTHER:PTHR31269
PANTHER:PTHR31269:SF2	InterPro:SLAC/SLAH	EnsemblPlantsGene:SORBI_3005G125400	TMHMM:TMhelix	UniParc:UPI00081AB643	InterPro:Voltage-dep_anion_channel
InterPro:Voltage-dep_anion_channel_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:54770158..54773326

Molecular Weight (calculated)

57663.8 Da

IEP (calculated)

6.752

GRAVY (calculated)

0.258

Length

526 amino acids

Sequence
(BLAST)

001: MEEAANSKTQ TPPPPARENG GGSVWFTHQP ADTVAFRSQP IPGGHHQPPR GATGVMIMSS DKLNHLAGAA PPEVHEEEED DELWRPKVDR FFIALEGPEL
101: DKLKIHSSSE LVPPSDKTWP FLLRFPVSAF GMCLGVSSQA ILWKTMASSS PTPTMFLHMT HKVNLVLWCI SVVLMCAITA VYALKAAFFF DAVRREYYHP
201: IRVNFFFAPW IACLLLVIGV PQSVARDPLP QWLWYALMAP VLVLELKIYG QWMSGGQRPL SKVANPSNHL AVVGNFVGAL LGANMGLREG PVFFFAVGLA
301: HYTVLFVTLY QRLPTTSETM PKAELYPALF LFVAAPSVAS MALARITAPE FGFGARMAYF VAMFLYASAS LAVRDNFLCG FRHVSLAWWA YTFPMTGAAV
401: ASIRYSAEVD NAFTRTLCVA LSAVAVLTVA GLFVTTLVHA LVLRKHFLDD ICIAIRDNKI KPIVELHEHD SPGRDDGSND DIEAGGQTVL YVWTYDACAA
501: QEAYIGNNAR TPQIAELHAC SASVVG

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.