CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97407	Canola	cytosol	22.69	99.32
Bra010388.1-P	Field mustard	plastid	98.61	98.61
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	72.07	93.03
CDX84361	Canola	plasma membrane	55.4	92.05
CDX89215	Canola	plastid	86.88	88.38
CDY19015	Canola	plastid	86.57	88.07
CDY29871	Canola	plastid	63.89	83.3
CDX92855	Canola	plastid	63.89	83.13
AT4G27970.6	Thale cress	plastid	63.89	79.77
Zm00001d010430_P001	Maize	plasma membrane	31.79	63.0
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	37.35	60.2
TraesCSU01G204200.1	Wheat	plasma membrane	23.61	57.95
TraesCS1B01G388600.1	Wheat	plasma membrane	32.56	56.57
GSMUA_Achr9P05400_001	Banana	plastid	36.88	53.59
TraesCS1A01G423900.1	Wheat	plasma membrane	39.35	50.6
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	37.5	47.74
TraesCS1B01G455100.1	Wheat	plasma membrane	39.2	47.39
TraesCS3A01G028100.1	Wheat	cytosol, peroxisome, plasma membrane	38.73	47.18
TraesCS1A01G423000.1	Wheat	cytosol, peroxisome, plasma membrane	39.2	47.04
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	37.5	46.82
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	36.88	46.32
OQU77336	Sorghum	cytosol	37.5	46.2
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	42.59	46.15
TraesCS1D01G432800.1	Wheat	plasma membrane	40.74	45.52
CDX87147	Canola	cytosol, nucleus, plasma membrane	43.36	45.1
TraesCS3B01G018300.1	Wheat	mitochondrion	37.96	44.97
KXG28459	Sorghum	cytosol, peroxisome, plasma membrane	36.42	44.87
Os05t0219900-01	Rice	cytosol, peroxisome, plasma membrane, plastid	43.06	44.86
TraesCS1D01G433100.1	Wheat	plasma membrane	40.59	44.8
TraesCSU01G001600.1	Wheat	plasma membrane	41.98	44.59
TraesCS1D01G433200.1	Wheat	plasma membrane	42.44	44.57
TraesCS1A01G424500.1	Wheat	plasma membrane	41.05	44.56
TraesCS1D01G126500.1	Wheat	cytosol, peroxisome, plasma membrane	41.51	44.54
Zm00001d009705_P001	Maize	plasma membrane	39.2	44.48
Os01t0385400-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	42.9	44.48
TraesCS1B01G456400.1	Wheat	plasma membrane	41.2	44.35
OQU77636	Sorghum	cytosol, peroxisome, plasma membrane	42.9	44.27
CDX80404	Canola	cytosol	43.36	44.18
TraesCS1B01G456500.1	Wheat	plasma membrane	40.9	44.02
TraesCS3B01G254700.1	Wheat	cytosol, peroxisome, plasma membrane	41.98	43.94
TraesCS1B01G456300.1	Wheat	plasma membrane	41.98	43.94
TraesCS1B01G456200.1	Wheat	plasma membrane	42.44	43.79
Zm00001d011393_P001	Maize	cytosol, peroxisome, plasma membrane	42.75	43.69
TraesCS1B01G456100.1	Wheat	cytosol, peroxisome, plasma membrane	40.28	43.65
GSMUA_Achr7P14260_001	Banana	cytosol	40.12	43.62
TraesCS1A01G424400.1	Wheat	plasma membrane, plastid	38.43	43.53
Zm00001d044181_P001	Maize	plasma membrane	42.13	43.33
TraesCS3D01G228400.1	Wheat	cytosol, nucleus, plasma membrane	41.98	43.31
TraesCS3D01G159600.1	Wheat	cytosol, peroxisome, plasma membrane	40.28	43.28
TraesCS1D01G432900.1	Wheat	plasma membrane	41.36	43.16
TraesCS3D01G017800.1	Wheat	mitochondrion, plasma membrane	39.51	43.03
TraesCS3B01G178600.1	Wheat	cytosol, peroxisome, plasma membrane	39.97	43.02
TraesCS1D01G432700.1	Wheat	cytosol, peroxisome, plasma membrane	39.97	42.95
Zm00001d037816_P001	Maize	plasma membrane	41.98	42.77
Zm00001d041653_P001	Maize	plastid	39.51	42.67
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	39.81	42.57
TraesCS1B01G147400.1	Wheat	plasma membrane	41.36	42.2
TraesCSU01G001400.1	Wheat	plasma membrane, plastid	40.9	42.2
Os01t0623200-01	Rice	cytosol, peroxisome, plasma membrane	42.59	41.95
Os07t0181100-01	Rice	cytosol, peroxisome, plasma membrane	40.28	41.83
Zm00001d039150_P001	Maize	plasma membrane	38.73	41.69
TraesCS1D01G432500.1	Wheat	plasma membrane	39.35	41.6
CDY44267	Canola	cytosol	38.89	41.04
TraesCS1A01G127500.1	Wheat	plasma membrane	41.36	41.04
EES20021	Sorghum	plastid	39.35	41.0
TraesCSU01G001500.1	Wheat	plasma membrane	42.28	40.71
CDY46973	Canola	cytosol	38.73	40.61
Os01t0226600-02	Rice	endoplasmic reticulum, peroxisome, plasma membrane	40.74	40.24
TraesCS3A01G225100.1	Wheat	plasma membrane	42.28	40.23
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	39.97	40.22
TraesCS1B01G456000.1	Wheat	cytosol, peroxisome, plasma membrane	35.49	39.79
CDX98059	Canola	cytosol, peroxisome, plastid	33.8	39.46
KXG22628	Sorghum	plastid	39.04	39.41
CDY00627	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.57	38.86
CDX88065	Canola	cytosol	43.36	37.72
CDY19522	Canola	endoplasmic reticulum	11.57	37.69
CDY30084	Canola	plasma membrane	33.8	37.37
CDY12933	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.57	36.95
Zm00001d039314_P001	Maize	plasma membrane	40.59	35.54
OQU87187	Sorghum	plasma membrane	42.59	34.29
KXG31512	Sorghum	plasma membrane	40.59	32.88
CDY12936	Canola	plasma membrane	19.14	32.55
CDY03280	Canola	plasma membrane	19.44	32.14
CDY39794	Canola	endoplasmic reticulum, nucleus, plasma membrane	19.14	32.04
CDY24881	Canola	extracellular	9.41	31.77
CDY08628	Canola	golgi, peroxisome, plasma membrane	18.52	31.01
CDY00628	Canola	endoplasmic reticulum, extracellular, plasma membrane	3.7	29.27
CDY19523	Canola	cytosol, extracellular, plasma membrane	4.63	23.62
CDY12934	Canola	cytosol, extracellular, plasma membrane	4.94	23.36
CDY08625	Canola	plasma membrane	6.94	22.39

Protein Annotations

Gene3D:1.50.10.150	MapMan:19.2.2.5.2	MapMan:24.3.10	Gene3D:3.10.110.10	GO:A0A078FMX9	UniProt:A0A078FMX9
EnsemblPlants:CDY14262	ProteinID:CDY14262	ProteinID:CDY14262.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0006810	GO:GO:0006873	GO:GO:0008150
GO:GO:0008308	GO:GO:0009987	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0019725	GO:GO:0055085	GO:GO:0098656	EnsemblPlantsGene:GSBRNA2T00078844001	InterPro:IPR000608	InterPro:IPR016135
InterPro:IPR038665	PFAM:PF00179	PFAM:PF03595	ScanProsite:PS00183	PFscan:PS50127	PANTHER:PTHR31269
PANTHER:PTHR31269:SF2	MetaCyc:PWY-7511	InterPro:SLAC/SLAH	SMART:SM00212	SUPFAM:SSF54495	TMHMM:TMhelix
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniPathway:UPA00143	UniParc:UPI0004EE5F9A	InterPro:Voltage-dep_anion_channel
InterPro:Voltage-dep_anion_channel_sf	SEG:seg	:	:	:	:

Description

BnaA08g13930DBnaA08g13930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMX9]

Coordinates

chrLK032041:+:494376..498838

Molecular Weight (calculated)

72681.7 Da

IEP (calculated)

9.813

GRAVY (calculated)

0.112

Length

648 amino acids

Sequence
(BLAST)

001: MNNPRSVNSS ASPANVDLVE NQRQSSSGEF SRLEKRIGAR KITFHSKSMP RGSNDKRYDL FRTMSGKLER QISNLRGKPI DTSLQDKEIT ESLTAERFLE
101: ALQGPELETL KEMEKIVLPE DKTWPFLLRF PVTSFGMCLG VSSQAIMWKT LATTKAEKFL HLTQVVNHVL WWISLVLLLS FSITYLFKTI FFFEAVRREF
201: KHPIRVNFFF APLISVLFLA LGIPHSITSS LPSILWYFFM APILLLEMKI YGQWMSGGQR RLSKVANPTN HLSIVGNFAG ALLGASLGLK EGPMFFFSVG
301: LAYYLVLFVT LYQRLPTNET LPKELHPVFF LFVAAPAVAS MAWTTISASF DIGSRIAYFI SLFLYFSLVV RINFFRGFKF SLAWWAYTFP MTAVATATIK
401: YSGEVTGLAT QILAVLLAGA ATLTVIGVLA LTVVHAFVKR DLFPNDFAIA ISAEQPKQKK WLKQLVNGSL ENSTRGLKVL DPEDTRIDIE APPLSNAVLE
501: MASKRILKEL KDLQKDPPTS CSAGPAAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS
601: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD KNKYESTART WTQKYAMG

Best Arabidopsis Sequence Match ( AT4G27970.6 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.