Factsheet for Zm00001d041653_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010430_P001	Maize	plasma membrane	41.67	76.45
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	78.67	73.29
Zm00001d037816_P001	Maize	plasma membrane	66.0	62.26
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	41.17	61.44
CDX84361	Canola	plasma membrane	37.0	56.92
Os07t0181100-01	Rice	cytosol, peroxisome, plasma membrane	57.83	55.61
KRH38307	Soybean	golgi, plasma membrane, plastid	37.67	54.59
CDY29871	Canola	plastid	43.83	52.92
Bra040840.1-P	Field mustard	plastid	43.67	52.72
CDX92855	Canola	plastid	43.67	52.61
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	42.67	51.0
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	46.83	50.63
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	48.67	50.09
AT4G27970.6	Thale cress	plastid	43.17	49.9
Bra026471.1-P	Field mustard	cytosol, plastid	46.0	49.55
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	42.67	49.33
KRH38311	Soybean	cytosol, nucleus, plasma membrane	49.0	49.25
KRH08776	Soybean	cytosol, nucleus, plasma membrane	48.83	49.08
PGSC0003DMT400074359	Potato	plasma membrane	48.83	49.0
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	50.67	48.48
Zm00001d044181_P001	Maize	plasma membrane	50.33	47.94
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	49.17	47.89
KRH08775	Soybean	cytosol, nucleus, plasma membrane	46.33	47.6
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	48.83	47.49
GSMUA_Achr7P14260_001	Banana	cytosol	47.17	47.48
Solyc09g014610.2.1	Tomato	plasma membrane	46.83	47.31
KRH35219	Soybean	cytosol	44.0	47.06
Zm00001d011393_P001	Maize	cytosol, peroxisome, plasma membrane	49.0	46.37
Zm00001d039314_P001	Maize	plasma membrane	56.33	45.68
Zm00001d009705_P001	Maize	plasma membrane	43.17	45.36
CDX87147	Canola	cytosol, nucleus, plasma membrane	46.5	44.78
Bra009724.1-P	Field mustard	cytosol	46.83	44.18
CDX80404	Canola	cytosol	46.83	44.18
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	46.67	44.09
Bra029390.1-P	Field mustard	cytosol	46.0	43.12
Zm00001d039150_P001	Maize	plasma membrane	43.17	43.02
CDY44267	Canola	cytosol	43.0	42.02
CDY46973	Canola	cytosol	43.17	41.91
CDY19015	Canola	plastid	42.5	40.03
Bra026294.1-P	Field mustard	plastid	42.5	39.97
CDX89215	Canola	plastid	42.33	39.87
CDY14262	Canola	plastid	42.67	39.51
Bra010388.1-P	Field mustard	plastid	42.33	39.2
CDX88065	Canola	cytosol	47.0	37.85
Zm00001d039241_P001	Maize	golgi, plasma membrane, plastid	24.17	37.28
Zm00001d002603_P001	Maize	nucleus	38.17	21.6

Protein Annotations

Gene3D:1.50.10.150	EntrezGene:103650569	MapMan:24.3.10	UniProt:A0A1D6MXJ7	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0006810	GO:GO:0006873	GO:GO:0008150	GO:GO:0008308
GO:GO:0009987	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0055085
GO:GO:0098656	InterPro:IPR038665	ProteinID:ONM33448.1	PFAM:PF03595	PANTHER:PTHR31269	PANTHER:PTHR31269:SF2
InterPro:SLAC/SLAH	TMHMM:TMhelix	UniParc:UPI0002207FC4	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf	EnsemblPlantsGene:Zm00001d041653
EnsemblPlants:Zm00001d041653_P001	EnsemblPlants:Zm00001d041653_T001	SEG:seg	:	:	:

Description

S-type anion channel SLAH3

Coordinates

chr3:+:131868756..131870956

Molecular Weight (calculated)

64878.3 Da

IEP (calculated)

9.052

GRAVY (calculated)

0.139

Length

600 amino acids

Sequence
(BLAST)

001: MEANSSKSGG LPPRNADVSN PKPPTHPPVP PQRLRETVVL PPLETQFHHP PGSGFRTVQQ TVSMSLPASP GSFGTATPTA AVTTDSADLR RQAMANASRM
101: APHRLAAHGA GSSSVRFTPQ EKEEAMMFRS QPIPGGPPPA RLASRAAGGG HGGRRAMNWD RRYDSFKTWS GKLERQINHL AGAGAEGSGD DGDLDSDVIG
201: SHRTCATSVP EVDRFYAALE GPELDQLKPS EDLVLPADRT WPFLLRFPVS AFGICMGVSS QAILWKVMAL SVPTTFLHVT AKANLALWCI SVALTCAVTA
301: VYACKAALFF EAVRREYYHP IRVNFFFAPW ITCLCLAIGA PRAVAPSTAA LPRWLWYLLM APLLCLGLKI YGQWMSGGQR RLSKVANPSN HLSVLGNFVG
401: AQLGATMGLR EGPVFFFAVG LAHYVVLFVT LYQRLPTNET LPKELHPVFF LFVAAPSVSS VAWAEISGGE FGHVSRVAFF VAMFLYASLA VRVNFFRGFR
501: FSLAWWAYTS PMAGAAVAAI RYSTVVDNAF TKALCVALSA VATLTVAALF ATTMVHAFVL KNLFPNDIAI AITERKVKPI MELQESDGNH IEATDDATEP

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.