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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009724.1-P Field mustard cytosol 99.37 99.37
CDX87147 Canola cytosol, nucleus, plasma membrane 87.74 89.57
CDX88065 Canola cytosol 99.53 84.97
AT5G24030.1 Thale cress cytosol, endoplasmic reticulum, nucleus 84.59 84.72
CDY44267 Canola cytosol 76.73 79.48
CDY46973 Canola cytosol 77.04 79.29
HORVU5Hr1G055480.1 Barley golgi 29.87 71.43
Zm00001d010430_P001 Maize plasma membrane 35.38 68.81
CDX84361 Canola plasma membrane 39.78 64.87
GSMUA_Achr5P06840_001 Banana cytosol, endoplasmic reticulum, peroxisome 39.31 62.19
KRH38307 Soybean golgi, plasma membrane, plastid 39.47 60.63
TraesCS1B01G388600.1 Wheat plasma membrane 34.75 59.25
KRH08776 Soybean cytosol, nucleus, plasma membrane 55.19 58.79
KRH38311 Soybean cytosol, nucleus, plasma membrane 54.87 58.46
GSMUA_Achr9P05400_001 Banana plastid 40.88 58.3
PGSC0003DMT400021864 Potato cytosol, peroxisome, plastid 50.79 58.2
PGSC0003DMT400074359 Potato plasma membrane 54.25 57.69
TraesCSU01G204200.1 Wheat plasma membrane 23.74 57.2
CDX92855 Canola plastid 44.65 57.03
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 44.5 56.37
CDY29871 Canola plastid 44.03 56.34
Solyc03g007770.2.1 Tomato cytosol, nucleus, plasma membrane 51.26 55.92
Solyc06g036440.1.1 Tomato cytosol, peroxisome, plasma membrane 54.25 55.92
VIT_16s0050g01860.t01 Wine grape cytosol, nucleus, plasma membrane 54.56 55.34
Solyc09g014610.2.1 Tomato plasma membrane 50.79 54.38
KRH08775 Soybean cytosol, nucleus, plasma membrane 49.84 54.28
PGSC0003DMT400051388 Potato cytosol, nucleus, plasma membrane 52.2 53.9
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 40.88 51.08
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 47.8 50.84
TraesCS3B01G178600.1 Wheat cytosol, peroxisome, plasma membrane 47.48 50.17
TraesCS1D01G126500.1 Wheat cytosol, peroxisome, plasma membrane 47.64 50.17
TraesCS1A01G423900.1 Wheat plasma membrane 39.62 50.0
Os01t0385400-01 Rice cytosol, endoplasmic reticulum, plasma membrane 48.9 49.76
GSMUA_Achr7P14260_001 Banana cytosol 46.38 49.5
TraesCS3D01G159600.1 Wheat cytosol, peroxisome, plasma membrane 46.7 49.25
Os05t0219900-01 Rice cytosol, peroxisome, plasma membrane, plastid 47.96 49.04
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 48.27 48.89
TraesCS3A01G151400.1 Wheat cytosol, peroxisome, plasma membrane 46.54 48.84
Zm00001d037816_P001 Maize plasma membrane 48.43 48.43
KXG22629 Sorghum cytosol, peroxisome, plasma membrane 38.99 48.06
TraesCS1B01G147400.1 Wheat plasma membrane 47.96 48.03
TraesCS1B01G455100.1 Wheat plasma membrane 40.41 47.95
TraesCS3B01G254700.1 Wheat cytosol, peroxisome, plasma membrane 46.54 47.82
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 40.57 47.78
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 39.62 47.37
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 38.99 47.15
TraesCS1D01G432800.1 Wheat plasma membrane 42.92 47.07
Zm00001d009706_P001 Maize cytosol, peroxisome, plasma membrane 38.36 47.01
Zm00001d041653_P001 Maize plastid 44.18 46.83
Zm00001d044181_P001 Maize plasma membrane 46.38 46.83
TraesCS3D01G228400.1 Wheat cytosol, nucleus, plasma membrane 46.07 46.66
Zm00001d011393_P001 Maize cytosol, peroxisome, plasma membrane 46.38 46.53
TraesCS1A01G127500.1 Wheat plasma membrane 47.64 46.4
OQU77336 Sorghum cytosol 38.05 46.01
Os01t0623200-01 Rice cytosol, peroxisome, plasma membrane 47.48 45.9
TraesCS3B01G018300.1 Wheat mitochondrion 39.47 45.89
TraesCSU01G001600.1 Wheat plasma membrane 43.87 45.74
TraesCS1D01G433100.1 Wheat plasma membrane 41.82 45.32
TraesCS1B01G456200.1 Wheat plasma membrane 44.65 45.22
TraesCS1D01G433200.1 Wheat plasma membrane 43.87 45.22
TraesCSU01G001400.1 Wheat plasma membrane, plastid 44.5 45.06
TraesCS1D01G432900.1 Wheat plasma membrane 43.71 44.77
TraesCS1B01G456400.1 Wheat plasma membrane 42.3 44.68
Zm00001d009705_P001 Maize plasma membrane 40.09 44.66
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 41.82 44.48
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 42.14 44.44
CDY19015 Canola plastid 44.5 44.43
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 39.94 44.41
TraesCS1A01G424500.1 Wheat plasma membrane 41.67 44.39
Os01t0226600-02 Rice endoplasmic reticulum, peroxisome, plasma membrane 45.6 44.21
TraesCS1B01G456500.1 Wheat plasma membrane 41.82 44.19
TraesCS1B01G456300.1 Wheat plasma membrane 42.92 44.1
CDX89215 Canola plastid 44.03 43.96
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 44.5 43.94
TraesCS3A01G225100.1 Wheat plasma membrane 46.7 43.61
CDY14262 Canola plastid 44.18 43.36
Os07t0181100-01 Rice cytosol, peroxisome, plasma membrane 42.45 43.27
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 40.25 43.03
EES20021 Sorghum plastid 41.67 42.6
TraesCS1D01G432500.1 Wheat plasma membrane 41.04 42.58
Zm00001d039150_P001 Maize plasma membrane 40.25 42.52
TraesCSU01G001500.1 Wheat plasma membrane 44.97 42.5
Zm00001d039314_P001 Maize plasma membrane 47.48 40.81
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 36.95 40.66
KXG22628 Sorghum plastid 40.72 40.34
CDX98059 Canola cytosol, peroxisome, plastid 34.91 40.0
CDY30084 Canola plasma membrane 35.06 38.05
KXG31512 Sorghum plasma membrane 46.23 36.75
CDY19522 Canola endoplasmic reticulum 11.48 36.68
OQU87187 Sorghum plasma membrane 46.23 36.52
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 11.01 36.27
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 11.48 35.96
CDY12936 Canola plasma membrane 18.55 30.97
CDY24881 Canola extracellular 9.28 30.73
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 18.4 30.23
CDY08628 Canola golgi, peroxisome, plasma membrane 17.92 29.46
CDY03280 Canola plasma membrane 18.08 29.34
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 3.3 25.61
CDY19523 Canola cytosol, extracellular, plasma membrane 4.09 20.47
CDY12934 Canola cytosol, extracellular, plasma membrane 4.4 20.44
CDY08625 Canola plasma membrane 5.82 18.41
CDX97407 Canola cytosol 0.63 2.7
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:A0A078CWI8EnsemblPlants:CDX80404ProteinID:CDX80404ProteinID:CDX80404.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0006810GO:GO:0006873
GO:GO:0008150GO:GO:0008308GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0019725
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00133470001InterPro:IPR038665PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF21
InterPro:SLAC/SLAHTMHMM:TMhelixUniParc:UPI0004EF05C7InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg
Description
BnaC07g30400D
Coordinates
chrLK031821:-:255676..258304
Molecular Weight (calculated)
72541.5 Da
IEP (calculated)
8.332
GRAVY (calculated)
-0.098
Length
636 amino acids
Sequence
(BLAST)
001: MEGRSYCVQI ELEEELPTLL RTATTEEMVG FDNYKDNNLP LPRFISRFHP YHASTTTLNG QEAARSSMEA HRSYIEDLKE TAPWMQINHQ RKPSLSMPTS
101: PNILMISDPT STSSDNNNTV STGKSVKFIS QPMAKVSSLY IGSGNDDDDG RRHDNHHHQQ NQQQSGQLQN QNPGMHKLKD HRYTSFKTWS GKLERQFTRK
201: PAAIEPETPN RPKENINTNE AMPVDRYYDA LEGPELETLR PLEEIVLPSE QTWPFLLRYP ISTFGMCLGV SSQAIMWKTL ATAEPTKFLH VPLWINQALW
301: FISVALVFTI AIIYLLKIIL YFEAVRREYY HPIRINFFFA PFISLLFLAL GVPPSVMTEL PQFLWYLLMF PFICLELKIY GQWMSGGQRR LSRVANPTNH
401: LSIVGNFVGA LLGASMGLRE GPMFFYAVGM AHYLVLFVTL YQRLPTNETL PKDLHPVFFL FVAAPSVASM AWAKITGSFD YGSKVCYFIA IFLYFSLAVR
501: INFFRGIKFS LSWWAYTFPM TGAAIATIRY ATVVRSTMTQ VMCVILCAIA TLVVSALLVT TIIHVFVLRD LFPNDYAIAI SNRPRRKQTS HHRWLDQLRN
601: VSSENIENFL KFTDSDSSQS NDLEAGNGKI QEKDSA
Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)
001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS
Arabidopsis Description
SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.