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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plasma membrane 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G005540.1 Barley golgi, plasma membrane 49.62 69.79
TraesCSU01G204200.1 Wheat plasma membrane 31.18 62.12
TraesCS1A01G423900.1 Wheat plasma membrane 57.22 59.72
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 59.89 59.21
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 60.46 58.89
TraesCS1B01G455100.1 Wheat plasma membrane 59.7 58.58
TraesCS3B01G018300.1 Wheat mitochondrion 59.89 57.59
KXG22629 Sorghum cytosol, peroxisome, plasma membrane 55.51 56.59
TraesCS1D01G432800.1 Wheat plasma membrane 62.17 56.38
TraesCSU01G001600.1 Wheat plasma membrane 64.64 55.74
CDX84361 Canola plasma membrane 41.25 55.64
TraesCS1D01G433200.1 Wheat plasma membrane 65.02 55.43
TraesCS1A01G424500.1 Wheat plasma membrane 62.17 54.77
TraesCS1D01G433100.1 Wheat plasma membrane 61.03 54.68
TraesCS1B01G456300.1 Wheat plasma membrane 63.69 54.12
TraesCS1D01G432900.1 Wheat plasma membrane 63.88 54.11
EES20021 Sorghum plastid 63.69 53.86
TraesCS1B01G456500.1 Wheat plasma membrane 61.22 53.49
TraesCS1B01G456200.1 Wheat plasma membrane 63.69 53.34
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 57.98 53.32
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 60.27 53.28
TraesCSU01G001400.1 Wheat plasma membrane, plastid 63.5 53.18
HORVU1Hr1G092740.1 Barley mitochondrion, peroxisome, plasma membrane 60.65 52.73
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 59.7 52.51
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 59.89 52.24
TraesCS1B01G456400.1 Wheat plasma membrane 58.94 51.49
KXG22628 Sorghum plastid 62.36 51.09
TraesCS1D01G432500.1 Wheat plasma membrane 59.13 50.73
HORVU1Hr1G092640.3 Barley mitochondrion 62.74 50.15
GSMUA_Achr9P05400_001 Banana plastid 42.4 50.0
TraesCSU01G001500.1 Wheat plasma membrane 63.88 49.93
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 54.75 49.83
CDX92855 Canola plastid 46.01 48.59
CDY29871 Canola plastid 45.82 48.49
Bra040840.1-P Field mustard plastid 45.82 48.49
HORVU1Hr1G092660.2 Barley plastid 60.08 48.02
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 45.44 47.61
KRH38307 Soybean golgi, plasma membrane, plastid 36.31 46.14
PGSC0003DMT400021864 Potato cytosol, peroxisome, plastid 48.67 46.13
AT4G27970.6 Thale cress plastid 45.25 45.86
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 43.35 44.79
Solyc03g007770.2.1 Tomato cytosol, nucleus, plasma membrane 48.86 44.08
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 50.0 43.98
Bra026471.1-P Field mustard cytosol, plastid 45.44 42.91
Solyc09g014610.2.1 Tomato plasma membrane 47.91 42.42
KRH08776 Soybean cytosol, nucleus, plasma membrane 48.1 42.38
PGSC0003DMT400074359 Potato plasma membrane 48.1 42.31
KRH38311 Soybean cytosol, nucleus, plasma membrane 47.91 42.21
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 42.02 42.02
KRH08775 Soybean cytosol, nucleus, plasma membrane 46.58 41.95
PGSC0003DMT400051388 Potato cytosol, nucleus, plasma membrane 48.67 41.56
VIT_16s0050g01860.t01 Wine grape cytosol, nucleus, plasma membrane 49.24 41.31
Solyc06g036440.1.1 Tomato cytosol, peroxisome, plasma membrane 48.29 41.17
KRH35219 Soybean cytosol 43.54 40.82
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 48.1 40.29
CDX87147 Canola cytosol, nucleus, plasma membrane 45.63 38.52
CDY19015 Canola plastid 46.39 38.3
OQU87187 Sorghum plasma membrane 58.56 38.26
CDX89215 Canola plastid 46.2 38.15
AT5G24030.1 Thale cress cytosol, endoplasmic reticulum, nucleus 46.01 38.11
CDX80404 Canola cytosol 46.01 38.05
Bra009724.1-P Field mustard cytosol 46.01 38.05
Bra026294.1-P Field mustard plastid 46.01 37.93
CDY14262 Canola plastid 46.2 37.5
Bra029390.1-P Field mustard cytosol 45.63 37.5
Bra010388.1-P Field mustard plastid 46.01 37.35
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 45.63 37.27
CDY46973 Canola cytosol 42.02 35.76
CDY44267 Canola cytosol 41.63 35.67
OQU82188 Sorghum plastid 42.02 33.84
EER99979 Sorghum plastid 26.81 33.57
CDX88065 Canola cytosol 46.01 32.48
KXG31512 Sorghum plasma membrane 46.2 30.38
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10EntrezGene:8068172UniProt:A0A1Z5R1V6GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR038665EnsemblPlants:OQU77336
ProteinID:OQU77336ProteinID:OQU77336.1PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF6EnsemblPlantsGene:SORBI_3009G029900
TMHMM:TMhelixUniParc:UPI0001A88E03InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfRefSeq:XP_002439222.1SEG:seg
Description
hypothetical protein
Coordinates
chr9:+:2668536..2670548
Molecular Weight (calculated)
57570.4 Da
IEP (calculated)
5.698
GRAVY (calculated)
0.343
Length
526 amino acids
Sequence
(BLAST)
001: MAAGMDGASP VARKEADVAV TVSAQAAAHG DQAAHVQETD IPYSIACSVP LSPSGLHLGA CTSICSDGDA VRMAINLSEE PWRDRRFDHL KTFSSCVERQ
101: LSTLHPPAPA EIEVVADSKI ISEEEEEEEE EETDDGDGEN EVPSADRYFS ALQGPELETL RATEVSTLPD NETWPFLLRF PVSAFGMCLG VSSQAMLWKS
201: LETEPSMAFL HVSPAVNQAL WWVSVALTGF VSAVYLLKAV FYFEAVRREF CNPIRVNFFF APWVACLFLV KGHPRPVAAI HDSHVVWYVL MTPILLLDLK
301: IYGQWLSGGG RRLSKVANPT SHLAIVGNFV GAVLGALVGL HEAPLFFFAV GLAHYAVLFV TLYQWLDTND VRLPKELHPV FFLFVAVPSV ASMAWARLSG
401: EFGFAAKIPY FISLFLFMSL VVRVNLFFRG VRFSLAWWAY TFPMTSVAMA TTVYASSVNS LVSRALAIGL AGIASVTVTG VLGATMYHAF VRKDLFPNDV
501: SIAISMQRPN KPNHAVAQLA RCIPLS
Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)
001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN
Arabidopsis Description
SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.