CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G094480.1	Barley	endoplasmic reticulum, extracellular	13.32	92.55
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	75.19	85.39
TraesCS2B01G416100.1	Wheat	plastid	75.19	84.66
TraesCS2D01G395700.1	Wheat	plastid	75.5	84.27
GSMUA_Achr8P12070_001	Banana	cytosol	53.14	69.54
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	61.56	68.95
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	55.28	66.85
GSMUA_Achr5P20180_001	Banana	cytosol	57.73	66.37
VIT_02s0025g04930.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	52.99	66.03
Solyc08g079770.2.1	Tomato	cytosol, peroxisome, plastid	51.76	60.9
AT1G12480.1	Thale cress	cytosol, nucleus, plasma membrane	51.76	60.79
Bra019770.1-P	Field mustard	cytosol, peroxisome, plastid	51.45	60.54
CDX98059	Canola	cytosol, peroxisome, plastid	51.15	60.18
PGSC0003DMT400009999	Potato	cytosol	51.61	60.18
CDY30084	Canola	plasma membrane	51.61	57.51
Zm00001d002603_P001	Maize	nucleus	88.97	54.81
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	33.69	42.64
OQU77336	Sorghum	cytosol	33.84	42.02
KXG28459	Sorghum	cytosol, peroxisome, plasma membrane	30.63	38.02
EES20021	Sorghum	plastid	35.68	37.46
OQU77636	Sorghum	cytosol, peroxisome, plasma membrane	35.68	37.1
KXG22628	Sorghum	plastid	35.53	36.14
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	34.46	34.94
EER99979	Sorghum	plastid	21.9	34.05
OQU87187	Sorghum	plasma membrane	40.12	32.55
KXG31512	Sorghum	plasma membrane	35.53	29.0

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	UniProt:A0A1Z5REL8	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006820
GO:GO:0006873	GO:GO:0006950	GO:GO:0008150	GO:GO:0008308	GO:GO:0008509	GO:GO:0009270
GO:GO:0009628	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0010037	GO:GO:0010118
GO:GO:0010193	GO:GO:0015698	GO:GO:0015711	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725
GO:GO:0019901	GO:GO:0019903	GO:GO:0050891	GO:GO:0055085	GO:GO:0090332	GO:GO:0098656
GO:GO:1902456	InterPro:IPR038665	EnsemblPlants:OQU82188	ProteinID:OQU82188	ProteinID:OQU82188.1	PFAM:PF03595
PANTHER:PTHR31269	PANTHER:PTHR31269:SF11	InterPro:SLAC/SLAH	EnsemblPlantsGene:SORBI_3006G186500	TMHMM:TMhelix	UniParc:UPI000B8B959E
InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:54157690..54160173

Molecular Weight (calculated)

71214.5 Da

IEP (calculated)

10.537

GRAVY (calculated)

0.103

Length

653 amino acids

Sequence
(BLAST)

001: MASSDPSPPH RPTTWTAMAA LAPAFSTYAP GWRRPVHVKA PVMLTYAARG GAYIGAAAHN ITRSALVLAH LDHRLAAEIM AADPSSSSMA QQTADIRAAP
101: PEDSRQMAMS GPLNVRGDRR PPPMQRAFSR QVSLGSGVTV LGMDRGGRNG GGRGQRALPR SGRSLGVLNH SGGLGQAGGD GAARRGGGGD FSMFRTKSTL
201: SKQNSLLPTR IRESDLDLPT HVEDQSAGRT AEDPLNKSVP AGRYFAALRG PELDEVRDYE DILLPKDEVW PFLLRFPIGC FGVCLGLGSQ AILWGALAAS
301: PAMRFLHVTP MINVALWLLA VTVLVATSVT YVLKCVFYFE AIRREYFHPV RVNFFFAPWI AAMFVTIGLP RAYAPERPHP AVWCAFVLPL FALELKIYGQ
401: WLSGGKRRLC KVANPSSHLS VVGNFVGAIL AARVGWAEAG KLLWAIGVAH YIVVFVTLYQ RLPTNEALPK ELHPVYSMFI ATPSAASLAW AAIYGSFDAV
501: ARTFFFMAIF LYLSLVVRIN FFRGFRFSLA WWSYTFPMTT ASLATVKYAE AVPCFASRAL ALSLSLMSST MVSLLLVSTL LHALVWRSLF PNDLAIAITK
601: DRQNGAAKPN GRGKRASKRV HDIKRWAKQA PLSLVSSITK SHSADKEEEE RTD

Best Arabidopsis Sequence Match ( AT1G12480.1 )
(BLAST)

001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH

Arabidopsis Description

SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.