Factsheet for GSMUA_Achr11P21580_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 1
plastid 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G094480.1	Barley	endoplasmic reticulum, extracellular	13.38	82.98
GSMUA_Achr5P20180_001	Banana	cytosol	77.7	79.75
GSMUA_Achr8P12070_001	Banana	cytosol	65.52	76.55
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	70.5	76.11
VIT_02s0025g04930.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	63.29	70.42
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	67.92	68.87
TraesCS2B01G416100.1	Wheat	plastid	68.27	68.62
TraesCS2D01G395700.1	Wheat	plastid	68.44	68.21
Bra019770.1-P	Field mustard	cytosol, peroxisome, plastid	61.41	64.5
CDX98059	Canola	cytosol, peroxisome, plastid	61.23	64.32
PGSC0003DMT400009999	Potato	cytosol	61.75	64.29
Solyc08g079770.2.1	Tomato	cytosol, peroxisome, plastid	61.06	64.14
AT1G12480.1	Thale cress	cytosol, nucleus, plasma membrane	60.21	63.13
OQU82188	Sorghum	plastid	68.95	61.56
CDY30084	Canola	plasma membrane	61.75	61.43
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	34.48	50.0
GSMUA_Achr9P05400_001	Banana	plastid	36.88	48.21
GSMUA_Achr2P06370_001	Banana	nucleus	8.58	43.48
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	36.54	41.85
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	41.85	40.8
GSMUA_Achr6P07610_001	Banana	golgi, mitochondrion, plasma membrane, plastid	22.47	38.76
GSMUA_Achr7P14260_001	Banana	cytosol	39.11	38.26
Zm00001d002603_P001	Maize	nucleus	67.75	37.26
GSMUA_Achr10P...	Banana	endoplasmic reticulum	22.64	36.57
GSMUA_Achr9P21990_001	Banana	plasma membrane	23.5	36.24
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	23.84	36.2
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	23.16	35.43

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0006810	GO:GO:0006873	GO:GO:0008150	GO:GO:0008308	GO:GO:0009987	GO:GO:0015698
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0055085	GO:GO:0098656	EnsemblPlantsGene:GSMUA_Achr11G21580_001
EnsemblPlants:GSMUA_Achr11P21580_001	EnsemblPlants:GSMUA_Achr11T21580_001	InterPro:IPR038665	UniProt:M0RU88	PFAM:PF03595	PANTHER:PTHR31269
PANTHER:PTHR31269:SF11	InterPro:SLAC/SLAH	TMHMM:TMhelix	UniParc:UPI000296E293	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
SEG:seg	:	:	:	:	:

Description

C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G21580_001]

Coordinates

chr11:-:22146247..22148183

Molecular Weight (calculated)

64099.7 Da

IEP (calculated)

10.292

GRAVY (calculated)

0.058

Length

583 amino acids

Sequence
(BLAST)

001: MTSAPSSSSS STEHHFVDIH PVLSDGNDNV NRLRERQSSN TAVKFRRGSG GGGGDVARTQ PQMSTFSRQI SLESGMAVLN MEKKNVKGGS NGNTKEEQRV
101: LLRNGKSLGG LNVAGGDAGQ RKGDFSIFRT KSTLGARQNS LMPLRKENEP DLTHGEGVPG STGADERVNK SVPAGRYFAA LRGPELDQVR DSEDILLPKD
201: EVWPFLLRFP IGCFGICLGL GSQAILWGAL ASSPAMAFLR VSPYINIALW LLALVILVSV SVTYTLKCIF YFEAIRREYF HPVRVNFFFA PWIACMFLAI
301: GTPPRWVPKH LHPAIWCAFI APVFVLEVKI YGQWLSGGKR RLCKVANPSS HLSVVGNFVG AILAAKVGWG EAGKFLWAVG LAHYVCVFVT LYQRLPTNEA
401: LPKELHPVYS MFIATPSAAS IAWTTIYGKF DAVSTTFYFI ALFLYCSLVV RINFFRGFKF SVAWWSYTFP MTTASLATIK YAESAPCFVS RGLALSLSLM
501: SSTMVSLLFV STLLHAFVWR SLFPNDLAIA ITKSRNGGAK AHGKEKKADR KGYDIKRWAK QSPLSLVSSI RKGNSADKDS EVK

Best Arabidopsis Sequence Match ( AT1G12480.1 )
(BLAST)

001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH

Arabidopsis Description

SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.