Factsheet for Bra019770.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98059	Canola	cytosol, peroxisome, plastid	99.46	99.46
AT1G12480.1	Thale cress	cytosol, nucleus, plasma membrane	89.37	89.21
VIT_02s0025g04930.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	69.73	73.86
HORVU2Hr1G094480.1	Barley	endoplasmic reticulum, extracellular	12.25	72.34
GSMUA_Achr8P12070_001	Banana	cytosol	57.66	64.13
Solyc08g079770.2.1	Tomato	cytosol, peroxisome, plastid	63.42	63.42
PGSC0003DMT400009999	Potato	cytosol	63.42	62.86
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	64.5	61.41
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	58.02	59.63
GSMUA_Achr5P20180_001	Banana	cytosol	60.0	58.63
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	60.0	57.91
TraesCS2B01G416100.1	Wheat	plastid	59.82	57.24
TraesCS2D01G395700.1	Wheat	plastid	59.64	56.58
OQU82188	Sorghum	plastid	60.54	51.45
Bra040840.1-P	Field mustard	plastid	40.9	45.67
Bra026471.1-P	Field mustard	cytosol, plastid	39.46	39.32
Bra026294.1-P	Field mustard	plastid	40.54	35.27
Bra009724.1-P	Field mustard	cytosol	40.0	34.91
Bra036662.1-P	Field mustard	endoplasmic reticulum, plasma membrane	15.32	34.84
Bra029390.1-P	Field mustard	cytosol	39.64	34.38
Bra010388.1-P	Field mustard	plastid	39.82	34.1
Bra027058.1-P	Field mustard	plasma membrane	22.52	32.81
Bra034473.1-P	Field mustard	extracellular, golgi, plasma membrane	10.81	32.43
Zm00001d002603_P001	Maize	nucleus	60.72	31.79
Bra034474.1-P	Field mustard	peroxisome	11.89	30.28

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	EnsemblPlantsGene:Bra019770	EnsemblPlants:Bra019770.1	EnsemblPlants:Bra019770.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0006820	GO:GO:0006873	GO:GO:0006950	GO:GO:0008150	GO:GO:0008308
GO:GO:0008509	GO:GO:0009270	GO:GO:0009628	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987
GO:GO:0010037	GO:GO:0010118	GO:GO:0010193	GO:GO:0015698	GO:GO:0015711	GO:GO:0016020
GO:GO:0016021	GO:GO:0019725	GO:GO:0019901	GO:GO:0019903	GO:GO:0050891	GO:GO:0055085
GO:GO:0090332	GO:GO:0098656	GO:GO:1902456	InterPro:IPR038665	UniProt:M4DTC7	PFAM:PF03595
PANTHER:PTHR31269	PANTHER:PTHR31269:SF11	InterPro:SLAC/SLAH	TMHMM:TMhelix	UniParc:UPI0001F3AD69	InterPro:Voltage-dep_anion_channel
InterPro:Voltage-dep_anion_channel_sf	SEG:seg	:	:	:	:

Description

AT1G12480 (E=2e-282) OZS1, SLAC1, RCD3, CDI3 | OZS1 (OZONE-SENSITIVE 1); transporter

Coordinates

chrA06:+:4510363..4512184

Molecular Weight (calculated)

62825.0 Da

IEP (calculated)

9.674

GRAVY (calculated)

-0.031

Length

555 amino acids

Sequence
(BLAST)

001: MEQKQSAPRS NFADINEVVP EEDAEQEPQQ QDKNKRFSSN RGPNRGRQRP YRGFSRQVSL ETGFSVLNRE SKGRGEKKSL PRSGRSFAGF ETRGIINNGG
101: DGRKGDFSIF RTKSTLSKQN SLLPSVIRER DIENSLRGED GETKDESINE NVSAGRYFAA LRGPELDEVK DNEDILLPKE EQWPFLLRFP IGCYGICLGL
201: SSQAVLWLAL AKSPATHFLH IPPMINLVIW LLALVALVSV SFTYILKCIF YFEAVKREYF HPVRVNFFFA PWVVCMFLAI SVPPVLSQKP LHPAIWCVFM
301: GPYFFLELKI YGQWLSGGRR RLCKVANPSS HLSIVGNFVG AILASKVGWN EVAKFLWAVG FAHYLVVFVT LYQRLPTSEA LPKELHPVYS MFIAAPSAAS
401: IAWNTIYGQF DGCSRTCFFI ALFLYISLVV RINFFTGFKF SVAWWSYTFP MTTASVATIK YAEAVPCFPS RALAITLSFI SSAMVCVLFV STLLHGFVWQ
501: TLFPNDLAIA ITNKRLTKEK KPFKRAYDLK RWGKQALSKK ISAEKDIEPE DESHH

Best Arabidopsis Sequence Match ( AT1G12480.1 )
(BLAST)

001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH

Arabidopsis Description

SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.