Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019770.1-P Field mustard cytosol, peroxisome, plastid 99.46 99.46
CDY30084 Canola plasma membrane 98.56 93.34
AT1G12480.1 Thale cress cytosol, nucleus, plasma membrane 89.37 89.21
VIT_02s0025g04930.t01 Wine grape cytosol, nucleus, plasma membrane, plastid 69.55 73.66
HORVU2Hr1G094480.1 Barley endoplasmic reticulum, extracellular 12.07 71.28
GSMUA_Achr8P12070_001 Banana cytosol 57.48 63.93
Solyc08g079770.2.1 Tomato cytosol, peroxisome, plastid 63.6 63.6
PGSC0003DMT400009999 Potato cytosol 63.6 63.04
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, nucleus, plastid 64.32 61.23
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 57.84 59.44
GSMUA_Achr5P20180_001 Banana cytosol 59.82 58.45
TraesCS2A01G398000.1 Wheat cytosol, peroxisome, plasma membrane, plastid 59.64 57.57
TraesCS2B01G416100.1 Wheat plastid 59.46 56.9
TraesCS2D01G395700.1 Wheat plastid 59.28 56.24
CDX84361 Canola plasma membrane 36.04 51.28
OQU82188 Sorghum plastid 60.18 51.15
CDY29871 Canola plastid 41.26 46.08
CDX92855 Canola plastid 41.08 45.78
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 39.82 44.02
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 5.59 37.8
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 12.79 36.79
CDX87147 Canola cytosol, nucleus, plasma membrane 40.72 36.28
CDY19522 Canola endoplasmic reticulum 12.97 36.18
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 12.97 35.47
CDY19015 Canola plastid 40.54 35.32
CDX89215 Canola plastid 40.54 35.32
CDX80404 Canola cytosol 40.0 34.91
CDY14262 Canola plastid 39.46 33.8
CDY44267 Canola cytosol 36.94 33.39
CDY46973 Canola cytosol 36.76 33.01
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 22.7 32.56
CDY12936 Canola plasma membrane 22.16 32.28
CDY03280 Canola plasma membrane 22.7 32.14
CDY08628 Canola golgi, peroxisome, plasma membrane 22.16 31.78
Zm00001d002603_P001 Maize nucleus 60.36 31.6
CDX88065 Canola cytosol 40.36 30.07
CDY24881 Canola extracellular 10.27 29.69
CDY19523 Canola cytosol, extracellular, plasma membrane 6.13 26.77
CDY12934 Canola cytosol, extracellular, plasma membrane 6.49 26.28
CDY08625 Canola plasma membrane 7.93 21.89
CDX97407 Canola cytosol 0.36 1.35
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:A0A078EBC6EnsemblPlants:CDX98059ProteinID:CDX98059ProteinID:CDX98059.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006873GO:GO:0008150
GO:GO:0008308GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0019725GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00105435001InterPro:IPR038665PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF11InterPro:SLAC/SLAH
TMHMM:TMhelixUniParc:UPI0004EE2263InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg:
Description
BnaA06g08100D
Coordinates
chrLK031902:+:780399..782217
Molecular Weight (calculated)
62850.9 Da
IEP (calculated)
9.522
GRAVY (calculated)
-0.032
Length
555 amino acids
Sequence
(BLAST)
001: MEQKQSAPRS NFADINEVVP EEDAEQEPQQ QDNNKRFSSN RGPNRGRQRP YRGFSRQVSL ETGFSVLNRE SKGRGEKKSL PRSGRSFAGF ETRGIINNGG
101: DGRKGDFSIF RTKSTLSKQN SLLPSVIRER DIENSLRGED GETKDESINE NVSAGRYFAA LRGPELDEVK DNEDILLPKE EQWPFLLRFP IGCYGICLGL
201: SSQAVLWLAL AKSPATHFLH IPPVINLVIW LLALVALVSV SFTYILKCIF YFEAVKREYF HPVRVNFFFA PWVVCMFLAI SVPPVLSQKP LHPAIWCVFM
301: GPYFFLELKI YGQWLSGGRR RLCKVANPSS HLSIVGNFVG AILASKVGWN EVAKFLWAVG FAHYLVVFVT LYQRLPTSEA LPKELHPVYS MFIAAPSAAS
401: IAWNTIYEQF DGCSRTCFFI ALFLYISLVV RINFFTGFKF SVAWWSYTFP MTTASVATIK YAEAVPCFPS RALAITLSFI SSAMVCVLFV STLLHGFVWQ
501: TLFPNDLAIA ITNKRLTKEK KPFKRAYDLK RWGKQALSKK ISAEKDIEPE DESHH
Best Arabidopsis Sequence Match ( AT1G12480.1 )
(BLAST)
001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH
Arabidopsis Description
SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.