Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19522 | Canola | endoplasmic reticulum | 94.3 | 91.46 |
| CDY12933 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 94.82 | 90.15 |
| CDY24881 | Canola | extracellular | 68.39 | 68.75 |
| AT1G62262.1 | Thale cress | plasma membrane | 92.23 | 48.77 |
| CDY12936 | Canola | plasma membrane | 84.97 | 43.04 |
| CDY39794 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 85.49 | 42.64 |
| CDY08628 | Canola | golgi, peroxisome, plasma membrane | 84.97 | 42.38 |
| CDY03280 | Canola | plasma membrane | 84.97 | 41.84 |
| GSMUA_Achr6P07610_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 60.1 | 34.32 |
| KRH51762 | Soybean | mitochondrion | 54.4 | 33.44 |
| KRH56158 | Soybean | golgi, peroxisome, plasma membrane | 61.66 | 32.16 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 58.55 | 31.3 |
| Solyc07g051950.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 56.99 | 30.81 |
| VIT_12s0059g00860.t01 | Wine grape | peroxisome, plasma membrane, plastid | 60.62 | 30.31 |
| KRH61084 | Soybean | golgi, peroxisome, plasma membrane | 60.62 | 30.23 |
| Solyc03g031590.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 58.03 | 30.03 |
| Solyc04g080990.1.1 | Tomato | cytosol, golgi, peroxisome | 60.62 | 29.4 |
| GSMUA_Achr1P25300_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 58.03 | 29.4 |
| KRH51125 | Soybean | plasma membrane | 56.48 | 29.07 |
| KRH02037 | Soybean | plasma membrane | 55.44 | 28.69 |
| Zm00001d039241_P001 | Maize | golgi, plasma membrane, plastid | 56.99 | 28.28 |
| TraesCS3B01G199200.1 | Wheat | plasma membrane | 56.99 | 28.13 |
| GSMUA_Achr7P17640_001 | Banana | golgi, plasma membrane, plastid | 55.96 | 28.12 |
| GSMUA_Achr9P21990_001 | Banana | plasma membrane | 54.92 | 28.04 |
| TraesCS3D01G174800.1 | Wheat | plasma membrane | 56.48 | 28.02 |
| HORVU3Hr1G033800.1 | Barley | plastid | 56.99 | 27.85 |
| TraesCS3A01G167000.1 | Wheat | plasma membrane | 56.48 | 27.05 |
| EER99979 | Sorghum | plastid | 55.96 | 25.71 |
| Os05t0269200-00 | Rice | cytosol, golgi, plasma membrane | 52.85 | 25.56 |
| VIT_18s0001g13440.t01 | Wine grape | golgi, plasma membrane, vacuole | 41.45 | 25.56 |
| KRH25357 | Soybean | plasma membrane | 39.38 | 25.42 |
| Os01t0247700-01 | Rice | extracellular, plasma membrane | 38.34 | 21.33 |
| CDX84361 | Canola | plasma membrane | 39.38 | 19.49 |
| HORVU5Hr1G066120.1 | Barley | extracellular, plasma membrane | 22.28 | 15.75 |
| HORVU2Hr1G118150.1 | Barley | peroxisome | 24.35 | 15.72 |
| CDY29871 | Canola | plastid | 39.9 | 15.49 |
| CDX92855 | Canola | plastid | 39.9 | 15.46 |
| CDX97408 | Canola | cytosol, peroxisome, plasma membrane, plastid | 39.38 | 15.14 |
| HORVU3Hr1G098700.1 | Barley | extracellular, plasma membrane | 24.35 | 14.24 |
| CDX98059 | Canola | cytosol, peroxisome, plastid | 36.79 | 12.79 |
| CDY30084 | Canola | plasma membrane | 37.31 | 12.29 |
| CDY19015 | Canola | plastid | 39.38 | 11.93 |
| CDX89215 | Canola | plastid | 39.38 | 11.93 |
| CDY14262 | Canola | plastid | 38.86 | 11.57 |
| CDX87147 | Canola | cytosol, nucleus, plasma membrane | 36.27 | 11.24 |
| CDX80404 | Canola | cytosol | 36.27 | 11.01 |
| CDY44267 | Canola | cytosol | 33.68 | 10.59 |
| CDY46973 | Canola | cytosol | 33.68 | 10.52 |
| CDX88065 | Canola | cytosol | 36.27 | 9.4 |
| CDY19523 | Canola | cytosol, extracellular, plasma membrane | 3.63 | 5.51 |
| CDY12934 | Canola | cytosol, extracellular, plasma membrane | 3.63 | 5.11 |
| CDX97407 | Canola | cytosol | 1.04 | 1.35 |
| CDY00628 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 0.0 | 0.0 |
| CDY08625 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.50.10.150 | MapMan:24.3.10 | GO:A0A078EHN4 | EnsemblPlants:CDY00627 | ProteinID:CDY00627 | ProteinID:CDY00627.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006873 |
| GO:GO:0008150 | GO:GO:0008308 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00110432001 | InterPro:IPR038665 | PFAM:PF03595 | PANTHER:PTHR31269 | PANTHER:PTHR31269:SF7 |
| InterPro:SLAC/SLAH | TMHMM:TMhelix | UniParc:UPI0004EB8BAD | InterPro:Voltage-dep_anion_channel | InterPro:Voltage-dep_anion_channel_sf | SEG:seg |
Description
BnaC04g22980D
Coordinates
chrLK031920:-:1004094..1004748
Molecular Weight (calculated)
21428.6 Da
IEP (calculated)
10.409
GRAVY (calculated)
0.648
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPASQVSV IANLVAARGA AEMGWKECAL CLFSLGMVHY LVIFVTLYQR LPGGNNFPTT LRPVFFLFFA APATGSLAWN SICGTFDTVA KMLFFLSLFI
101: FVSLVCRPTL LKKSIKRFNV AWWAYSFPIT FLALDSVHYA QEVKDHVASA LMFIFSSTSV LIFLGVMLLT AANSKRLLRR DPVLWSATGP KNR
101: FVSLVCRPTL LKKSIKRFNV AWWAYSFPIT FLALDSVHYA QEVKDHVASA LMFIFSSTSV LIFLGVMLLT AANSKRLLRR DPVLWSATGP KNR
001: MEIPSQEIHI MIDNTISRRK ERKTNLADAE PIVLMSVLSS LHAGYFRISL SLCSQALLWK IMVHLHSELP SMAYYLLWYL ALATQVSLCF LYAFKCIFLF
101: DMVKEEFSHY IGVNYLYAPS ISCLLLLQSA PMIEPHSVLY QTLFWIFAVP VLTLDTKLYG QWFTTEKRFL SIMANPASQV SVIANLVAAR GAAEMGWKEC
201: ALCLFSLGMV HYLVIFVTLY QRLPGGNNFP TTLRPVFFLF FAAPATASLA WNSICGNFDT IAKMLFFLSL FIFISLVCRP NLLKKSIKRF NVAWWAYSFP
301: ITFLALNSVQ YAQEVKDHVA SVLMFIFSSM SVLIFISVML LTAANSKRLL RRDHVLWSST GPKDK
101: DMVKEEFSHY IGVNYLYAPS ISCLLLLQSA PMIEPHSVLY QTLFWIFAVP VLTLDTKLYG QWFTTEKRFL SIMANPASQV SVIANLVAAR GAAEMGWKEC
201: ALCLFSLGMV HYLVIFVTLY QRLPGGNNFP TTLRPVFFLF FAAPATASLA WNSICGNFDT IAKMLFFLSL FIFISLVCRP NLLKKSIKRF NVAWWAYSFP
301: ITFLALNSVQ YAQEVKDHVA SVLMFIFSSM SVLIFISVML LTAANSKRLL RRDHVLWSST GPKDK
Arabidopsis Description
SLAH4S-type anion channel SLAH4 [Source:UniProtKB/Swiss-Prot;Acc:A8MRV9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.