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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome, plastid
iPSORT:plastid
MultiLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G066120.1 Barley extracellular, plasma membrane 64.21 70.33
HORVU3Hr1G098700.1 Barley extracellular, plasma membrane 67.89 61.52
Os01t0247700-01 Rice extracellular, plasma membrane 53.18 45.82
TraesCS3B01G199200.1 Wheat plasma membrane 59.87 45.78
TraesCS3D01G174800.1 Wheat plasma membrane 59.2 45.5
HORVU3Hr1G033800.1 Barley plastid 59.53 45.06
TraesCS3A01G167000.1 Wheat plasma membrane 59.53 44.17
GSMUA_Achr6P07610_001 Banana golgi, mitochondrion, plasma membrane, plastid 46.15 40.83
Zm00001d039241_P001 Maize golgi, plasma membrane, plastid 51.84 39.85
EER99979 Sorghum plastid 49.83 35.48
VIT_18s0001g13440.t01 Wine grape golgi, plasma membrane, vacuole 36.45 34.82
KRH25357 Soybean plasma membrane 34.45 34.45
GSMUA_Achr9P21990_001 Banana plasma membrane 43.14 34.13
GSMUA_Achr1P25300_001 Banana cytosol, endoplasmic reticulum, plasma membrane 43.48 34.12
GSMUA_Achr10P... Banana endoplasmic reticulum 41.14 34.07
Bra034474.1-P Field mustard peroxisome 24.75 33.95
HORVU7Hr1G076200.1 Barley plastid 20.07 32.79
GSMUA_Achr7P17640_001 Banana golgi, plasma membrane, plastid 41.81 32.55
KRH51762 Soybean mitochondrion 34.11 32.48
Solyc07g051950.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 38.13 31.93
KRH61084 Soybean golgi, peroxisome, plasma membrane 38.46 29.72
VIT_12s0059g00860.t01 Wine grape peroxisome, plasma membrane, plastid 37.79 29.27
KRH56158 Soybean golgi, peroxisome, plasma membrane 35.79 28.92
Solyc04g080990.1.1 Tomato cytosol, golgi, peroxisome 37.46 28.14
Solyc03g031590.2.1 Tomato cytosol, peroxisome, plasma membrane 34.78 27.88
CDY12936 Canola plasma membrane 35.12 27.56
Bra027058.1-P Field mustard plasma membrane 35.12 27.56
AT1G62262.1 Thale cress plasma membrane 33.44 27.4
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 35.45 27.39
AT1G62280.1 Thale cress plasma membrane 35.12 27.27
CDY08628 Canola golgi, peroxisome, plasma membrane 35.12 27.13
Bra036662.1-P Field mustard endoplasmic reticulum, plasma membrane 22.07 27.05
CDY03280 Canola plasma membrane 35.45 27.04
KRH02037 Soybean plasma membrane 31.44 25.2
HORVU5Hr1G055480.1 Barley golgi 22.07 24.81
KRH51125 Soybean plasma membrane 31.1 24.8
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 6.69 24.39
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 15.72 24.35
CDY19522 Canola endoplasmic reticulum 15.72 23.62
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 15.72 23.15
HORVU3Hr1G030850.3 Barley cytosol 25.08 22.06
CDY08625 Canola plasma membrane 14.38 21.39
HORVU3Hr1G005540.1 Barley golgi, plasma membrane 26.09 20.86
CDY19523 Canola cytosol, extracellular, plasma membrane 7.36 17.32
CDY12934 Canola cytosol, extracellular, plasma membrane 7.69 16.79
Bra034473.1-P Field mustard extracellular, golgi, plasma membrane 9.36 15.14
CDY24881 Canola extracellular 9.36 14.58
HORVU1Hr1G092740.1 Barley mitochondrion, peroxisome, plasma membrane 25.75 12.73
HORVU1Hr1G092640.3 Barley mitochondrion 26.42 12.01
HORVU3Hr1G030840.1 Barley cytosol 20.4 11.98
HORVU1Hr1G092660.2 Barley plastid 24.75 11.25
HORVU2Hr1G094480.1 Barley endoplasmic reticulum, extracellular 1.0 3.19
CDX97407 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:HORVU2Hr1G118150.1EnsemblPlantsGene:HORVU2Hr1G118150Gene3D:1.50.10.150GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR038665InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269PANTHER:PTHR31269:SF4PFAM:PF03595SEG:segTMHMM:TMhelixUniParc:UPI000B476DA3
UniProt:A0A287JLS3MapMan:24.3.10::::
Description
No Description!
Coordinates
chrchr2H:+:741971679..741972794
Molecular Weight (calculated)
26623.1 Da
IEP (calculated)
11.476
GRAVY (calculated)
0.298
Length
299 amino acids
Sequence
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XTGAPATGVG APSHRRRVPA AGRPASALPP PARPDLDRSL
101: PSAAFVLLWS LALLTLFALC VLYVARCVLR LPVVRTEFWH HVGMNYLFAP WISWLLLLQA TPFLRPDAPS YHMLWWAFSL PILVLDVKVY DQWFTRGRKF
201: LSMVANPASH MTVIANLMTA RAAAKMGWHE GVVAMFTVGA AHYLVLFVTL YQRFLGSDSL SAMLRPVFFL FFTAPRRITG CPAEARAKKK TATKRLFQK
Best Arabidopsis Sequence Match ( AT1G62262.1 )
(BLAST)
001: MEIPSQEIHI MIDNTISRRK ERKTNLADAE PIVLMSVLSS LHAGYFRISL SLCSQALLWK IMVHLHSELP SMAYYLLWYL ALATQVSLCF LYAFKCIFLF
101: DMVKEEFSHY IGVNYLYAPS ISCLLLLQSA PMIEPHSVLY QTLFWIFAVP VLTLDTKLYG QWFTTEKRFL SIMANPASQV SVIANLVAAR GAAEMGWKEC
201: ALCLFSLGMV HYLVIFVTLY QRLPGGNNFP TTLRPVFFLF FAAPATASLA WNSICGNFDT IAKMLFFLSL FIFISLVCRP NLLKKSIKRF NVAWWAYSFP
301: ITFLALNSVQ YAQEVKDHVA SVLMFIFSSM SVLIFISVML LTAANSKRLL RRDHVLWSST GPKDK
Arabidopsis Description
SLAH4S-type anion channel SLAH4 [Source:UniProtKB/Swiss-Prot;Acc:A8MRV9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.