Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00627 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.77 | 92.23 |
| CDY19522 | Canola | endoplasmic reticulum | 47.4 | 86.93 |
| CDY12933 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 47.4 | 85.22 |
| CDY00628 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 18.36 | 81.71 |
| AT1G62280.1 | Thale cress | plasma membrane | 83.84 | 79.48 |
| CDY19523 | Canola | cytosol, extracellular, plasma membrane | 23.56 | 67.72 |
| CDY12934 | Canola | cytosol, extracellular, plasma membrane | 24.11 | 64.23 |
| CDY08625 | Canola | plasma membrane | 33.97 | 61.69 |
| GSMUA_Achr6P07610_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 52.33 | 56.51 |
| KRH56158 | Soybean | golgi, peroxisome, plasma membrane | 55.07 | 54.32 |
| KRH51762 | Soybean | mitochondrion | 46.58 | 54.14 |
| Solyc07g051950.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 52.6 | 53.78 |
| Solyc03g031590.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 54.25 | 53.08 |
| KRH25357 | Soybean | plasma membrane | 43.29 | 52.84 |
| KRH61084 | Soybean | golgi, peroxisome, plasma membrane | 55.62 | 52.45 |
| VIT_18s0001g13440.t01 | Wine grape | golgi, plasma membrane, vacuole | 44.93 | 52.4 |
| GSMUA_Achr1P25300_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 53.97 | 51.71 |
| KRH51125 | Soybean | plasma membrane | 52.6 | 51.2 |
| VIT_12s0059g00860.t01 | Wine grape | peroxisome, plasma membrane, plastid | 53.97 | 51.04 |
| GSMUA_Achr9P21990_001 | Banana | plasma membrane | 52.6 | 50.79 |
| KRH02037 | Soybean | plasma membrane | 51.78 | 50.67 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 49.59 | 50.14 |
| Solyc04g080990.1.1 | Tomato | cytosol, golgi, peroxisome | 53.7 | 49.25 |
| GSMUA_Achr7P17640_001 | Banana | golgi, plasma membrane, plastid | 50.68 | 48.18 |
| TraesCS3B01G199200.1 | Wheat | plasma membrane | 50.41 | 47.06 |
| TraesCS3D01G174800.1 | Wheat | plasma membrane | 50.14 | 47.04 |
| Zm00001d039241_P001 | Maize | golgi, plasma membrane, plastid | 50.14 | 47.04 |
| HORVU3Hr1G033800.1 | Barley | plastid | 50.41 | 46.58 |
| TraesCS3A01G167000.1 | Wheat | plasma membrane | 50.14 | 45.41 |
| Os05t0269200-00 | Rice | cytosol, golgi, plasma membrane | 48.77 | 44.61 |
| Os01t0247700-01 | Rice | extracellular, plasma membrane | 41.1 | 43.23 |
| EER99979 | Sorghum | plastid | 49.59 | 43.1 |
| HORVU5Hr1G066120.1 | Barley | extracellular, plasma membrane | 27.67 | 37.0 |
| HORVU2Hr1G118150.1 | Barley | peroxisome | 27.4 | 33.44 |
| HORVU3Hr1G098700.1 | Barley | extracellular, plasma membrane | 28.49 | 31.52 |
| AT4G27970.6 | Thale cress | plastid | 34.52 | 24.28 |
| AT1G12480.1 | Thale cress | cytosol, nucleus, plasma membrane | 35.07 | 23.02 |
| AT5G24030.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 32.33 | 18.58 |
Protein Annotations
| Gene3D:1.50.10.150 | MapMan:24.3.10 | EntrezGene:5007829 | UniProt:A8MRV9 | EMBL:AC000375 | ProteinID:AEE33943.1 |
| ArrayExpress:AT1G62262 | EnsemblPlantsGene:AT1G62262 | RefSeq:AT1G62262 | TAIR:AT1G62262 | RefSeq:AT1G62262-TAIR-G | EnsemblPlants:AT1G62262.1 |
| TAIR:AT1G62262.1 | Unigene:At.66077 | EMBL:DQ108890 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006873 | GO:GO:0008150 |
| GO:GO:0008308 | GO:GO:0009987 | GO:GO:0015698 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
| GO:GO:0055085 | GO:GO:0098656 | InterPro:IPR038665 | RefSeq:NP_001077757.1 | PFAM:PF03595 | PANTHER:PTHR31269 |
| PANTHER:PTHR31269:SF7 | InterPro:SLAC/SLAH | Symbol:SLAH4 | TMHMM:TMhelix | UniParc:UPI0001505779 | InterPro:Voltage-dep_anion_channel |
| InterPro:Voltage-dep_anion_channel_sf | SEG:seg | : | : | : | : |
Description
SLAH4S-type anion channel SLAH4 [Source:UniProtKB/Swiss-Prot;Acc:A8MRV9]
Coordinates
chr1:-:23000157..23002096
Molecular Weight (calculated)
41585.6 Da
IEP (calculated)
9.141
GRAVY (calculated)
0.569
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIPSQEIHI MIDNTISRRK ERKTNLADAE PIVLMSVLSS LHAGYFRISL SLCSQALLWK IMVHLHSELP SMAYYLLWYL ALATQVSLCF LYAFKCIFLF
101: DMVKEEFSHY IGVNYLYAPS ISCLLLLQSA PMIEPHSVLY QTLFWIFAVP VLTLDTKLYG QWFTTEKRFL SIMANPASQV SVIANLVAAR GAAEMGWKEC
201: ALCLFSLGMV HYLVIFVTLY QRLPGGNNFP TTLRPVFFLF FAAPATASLA WNSICGNFDT IAKMLFFLSL FIFISLVCRP NLLKKSIKRF NVAWWAYSFP
301: ITFLALNSVQ YAQEVKDHVA SVLMFIFSSM SVLIFISVML LTAANSKRLL RRDHVLWSST GPKDK
101: DMVKEEFSHY IGVNYLYAPS ISCLLLLQSA PMIEPHSVLY QTLFWIFAVP VLTLDTKLYG QWFTTEKRFL SIMANPASQV SVIANLVAAR GAAEMGWKEC
201: ALCLFSLGMV HYLVIFVTLY QRLPGGNNFP TTLRPVFFLF FAAPATASLA WNSICGNFDT IAKMLFFLSL FIFISLVCRP NLLKKSIKRF NVAWWAYSFP
301: ITFLALNSVQ YAQEVKDHVA SVLMFIFSSM SVLIFISVML LTAANSKRLL RRDHVLWSST GPKDK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.