Factsheet for VIT_18s0001g13440.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

plastid 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51762	Soybean	mitochondrion	57.19	57.01
KRH61084	Soybean	golgi, peroxisome, plasma membrane	68.05	55.04
GSMUA_Achr6P07610_001	Banana	golgi, mitochondrion, plasma membrane, plastid	58.15	53.85
VIT_12s0059g00860.t01	Wine grape	peroxisome, plasma membrane, plastid	63.9	51.81
Bra034474.1-P	Field mustard	peroxisome	33.55	48.17
Solyc04g080990.1.1	Tomato	cytosol, golgi, peroxisome	61.02	47.99
Os01t0247700-01	Rice	extracellular, plasma membrane	52.4	47.26
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	57.51	47.24
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	57.83	47.14
GSMUA_Achr9P21990_001	Banana	plasma membrane	56.55	46.83
GSMUA_Achr10P...	Banana	endoplasmic reticulum	53.67	46.54
CDY00628	Canola	endoplasmic reticulum, extracellular, plasma membrane	12.14	46.34
AT1G62262.1	Thale cress	plasma membrane	52.4	44.93
AT1G62280.1	Thale cress	plasma membrane	53.04	43.12
Bra027058.1-P	Field mustard	plasma membrane	52.4	43.04
CDY12936	Canola	plasma membrane	52.08	42.78
Zm00001d039241_P001	Maize	golgi, plasma membrane, plastid	53.04	42.67
TraesCS3B01G199200.1	Wheat	plasma membrane	52.72	42.2
TraesCS3D01G174800.1	Wheat	plasma membrane	52.4	42.16
CDY08628	Canola	golgi, peroxisome, plasma membrane	52.08	42.12
HORVU3Hr1G033800.1	Barley	plastid	53.04	42.03
CDY39794	Canola	endoplasmic reticulum, nucleus, plasma membrane	51.44	41.6
CDY00627	Canola	endoplasmic reticulum, extracellular, plasma membrane	25.56	41.45
HORVU5Hr1G066120.1	Barley	extracellular, plasma membrane	36.1	41.39
TraesCS3A01G167000.1	Wheat	plasma membrane	52.4	40.69
Os05t0269200-00	Rice	cytosol, golgi, plasma membrane	51.76	40.6
CDY03280	Canola	plasma membrane	50.8	40.56
EER99979	Sorghum	plastid	53.99	40.24
Bra036662.1-P	Field mustard	endoplasmic reticulum, plasma membrane	30.99	39.75
CDY19522	Canola	endoplasmic reticulum	24.92	39.2
CDY12933	Canola	endoplasmic reticulum, extracellular, plasma membrane	24.92	38.42
CDY19523	Canola	cytosol, extracellular, plasma membrane	15.34	37.8
CDY12934	Canola	cytosol, extracellular, plasma membrane	15.97	36.5
HORVU2Hr1G118150.1	Barley	peroxisome	34.82	36.45
HORVU3Hr1G098700.1	Barley	extracellular, plasma membrane	36.74	34.85
CDY08625	Canola	plasma membrane	21.73	33.83
Bra034473.1-P	Field mustard	extracellular, golgi, plasma membrane	16.61	28.11
CDY24881	Canola	extracellular	16.61	27.08
VIT_02s0025g04930.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	39.3	23.47
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	35.78	17.86
CDX97407	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.50.10.150	EntrezGene:100266155	wikigene:100266155	MapMan:24.3.10	ProteinID:CCB45994	ProteinID:CCB45994.1
UniProt:F6GZQ2	EMBL:FN595227	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	EntrezGene:LOC100266155	wikigene:LOC100266155	PFAM:PF03595
PANTHER:PTHR31269	PANTHER:PTHR31269:SF9	TMHMM:TMhelix	UniParc:UPI00021097DD	ArrayExpress:VIT_18s0001g13440	EnsemblPlantsGene:VIT_18s0001g13440
EnsemblPlants:VIT_18s0001g13440.t01	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf	RefSeq:XP_002280770	RefSeq:XP_002280770.1	SEG:seg

Description

No Description!

Coordinates

chr18:+:11503598..11504539

Molecular Weight (calculated)

35194.7 Da

IEP (calculated)

10.448

GRAVY (calculated)

0.618

Length

313 amino acids

Sequence
(BLAST)

001: MASTQSEIEI VVDASPVAAQ EHRRLFIIVA KRSISSVLTR FHAGYFRISL SLGGQTLLWK TLIDPSHGSN PPWRLLQTLP PLCFILLWSL ALFTNVLLSL
101: LYISRCFFRF RMVEAEFLHH VGVNYFFAPW ISWFLLLQSA PFVAPNTVSY LVLWWVFAVP VVTLDVKIYG QWFTKGKQFL TLVANPTSQL SVIGNLVGSR
201: AAAQMGWKES AVCLFSLGMV HYLVLFVTLY QRLPGGDRLP ATLRPVFSLF VAAPSMASLA WESIAGRFDT ASKMLLFLSL FLFASLVMLT GLKIRIKKAT
301: LFESILSRDS PIH

Best Arabidopsis Sequence Match ( AT1G62280.1 )
(BLAST)

001: MEIPRQEIHI EIDNSIPSSK EFKTGLADAK PVVLMSALRS LHAGYFRISL SLCSQALLWK IMIAPESPSM SHMHSKLPSM AFHLLWYLAL VTQVSLCFLY
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN

Arabidopsis Description

SLAH1SLAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8P4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.