Factsheet for VIT_16s0050g01860.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G055480.1	Barley	golgi	32.85	77.44
Zm00001d010430_P001	Maize	plasma membrane	36.84	70.64
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	44.98	70.15
GSMUA_Achr9P05400_001	Banana	plastid	47.69	67.04
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	59.01	66.67
KRH38307	Soybean	golgi, plasma membrane, plastid	43.86	66.43
KRH38311	Soybean	cytosol, nucleus, plasma membrane	62.36	65.49
KRH08776	Soybean	cytosol, nucleus, plasma membrane	62.2	65.33
PGSC0003DMT400074359	Potato	plasma membrane	61.4	64.38
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	59.17	63.64
Solyc09g014610.2.1	Tomato	plasma membrane	59.97	63.3
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	62.2	63.21
TraesCS1B01G388600.1	Wheat	plasma membrane	37.48	63.0
KRH08775	Soybean	cytosol, nucleus, plasma membrane	57.26	61.47
TraesCSU01G204200.1	Wheat	plasma membrane	25.68	60.98
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	59.81	60.88
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	57.58	60.37
Bra026471.1-P	Field mustard	cytosol, plastid	53.11	59.78
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	47.37	58.35
KRH35219	Soybean	cytosol	50.56	56.51
GSMUA_Achr7P14260_001	Banana	cytosol	53.59	56.38
TraesCS1A01G423900.1	Wheat	plasma membrane	45.3	56.35
CDX87147	Canola	cytosol, nucleus, plasma membrane	54.7	55.06
Bra009724.1-P	Field mustard	cytosol	55.5	54.72
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	55.34	54.65
CDX80404	Canola	cytosol	55.34	54.56
Os01t0385400-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	54.07	54.24
TraesCS3B01G178600.1	Wheat	cytosol, peroxisome, plasma membrane	51.99	54.15
TraesCS3B01G254700.1	Wheat	cytosol, peroxisome, plasma membrane	53.27	53.96
TraesCS3A01G028100.1	Wheat	cytosol, peroxisome, plasma membrane	45.14	53.2
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	51.36	53.14
TraesCS3D01G159600.1	Wheat	cytosol, peroxisome, plasma membrane	50.88	52.9
Os05t0219900-01	Rice	cytosol, peroxisome, plasma membrane, plastid	52.47	52.89
TraesCS3D01G228400.1	Wheat	cytosol, nucleus, plasma membrane	52.95	52.87
TraesCS1D01G126500.1	Wheat	cytosol, peroxisome, plasma membrane	50.72	52.65
Bra029390.1-P	Field mustard	cytosol	53.43	52.34
KXG28459	Sorghum	cytosol, peroxisome, plasma membrane	43.86	52.28
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	42.9	52.13
TraesCS1A01G423000.1	Wheat	cytosol, peroxisome, plasma membrane	44.5	51.67
OQU77636	Sorghum	cytosol, peroxisome, plasma membrane	51.67	51.59
Zm00001d044181_P001	Maize	plasma membrane	51.83	51.59
TraesCS1B01G455100.1	Wheat	plasma membrane	44.02	51.49
TraesCS1D01G432800.1	Wheat	plasma membrane	47.53	51.38
Os01t0623200-01	Rice	cytosol, peroxisome, plasma membrane	53.91	51.37
Zm00001d011393_P001	Maize	cytosol, peroxisome, plasma membrane	51.83	51.26
CDY44267	Canola	cytosol	50.08	51.14
CDY46973	Canola	cytosol	50.4	51.13
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	42.26	51.06
Zm00001d037816_P001	Maize	plasma membrane	51.67	50.94
TraesCS3B01G018300.1	Wheat	mitochondrion	44.34	50.82
Zm00001d041653_P001	Maize	plastid	48.48	50.67
TraesCS1B01G147400.1	Wheat	plasma membrane	51.2	50.55
TraesCSU01G001600.1	Wheat	plasma membrane	48.64	50.0
TraesCS1D01G433200.1	Wheat	plasma membrane	49.12	49.92
Zm00001d009705_P001	Maize	plasma membrane	45.14	49.56
TraesCS1D01G432900.1	Wheat	plasma membrane	48.96	49.44
TraesCS1B01G456300.1	Wheat	plasma membrane	48.64	49.27
OQU77336	Sorghum	cytosol	41.31	49.24
TraesCS1B01G456200.1	Wheat	plasma membrane	49.12	49.04
TraesCS1B01G456100.1	Wheat	cytosol, peroxisome, plasma membrane	46.57	48.83
TraesCS1D01G432700.1	Wheat	cytosol, peroxisome, plasma membrane	46.89	48.76
TraesCS1D01G433100.1	Wheat	plasma membrane	45.61	48.72
TraesCS3A01G225100.1	Wheat	plasma membrane	52.63	48.46
TraesCS1A01G127500.1	Wheat	plasma membrane	50.4	48.39
TraesCS1B01G456400.1	Wheat	plasma membrane	46.41	48.34
TraesCS1A01G424400.1	Wheat	plasma membrane, plastid	44.02	48.25
TraesCS3D01G017800.1	Wheat	mitochondrion, plasma membrane	45.77	48.24
Os07t0181100-01	Rice	cytosol, peroxisome, plasma membrane	47.69	47.92
TraesCSU01G001400.1	Wheat	plasma membrane, plastid	47.85	47.77
TraesCS1A01G424500.1	Wheat	plasma membrane	45.45	47.74
TraesCS1B01G456500.1	Wheat	plasma membrane	45.77	47.67
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	48.64	47.36
Zm00001d039150_P001	Maize	plasma membrane	45.45	47.34
Os01t0226600-02	Rice	endoplasmic reticulum, peroxisome, plasma membrane	49.44	47.26
TraesCS1D01G432500.1	Wheat	plasma membrane	45.93	46.98
CDX88065	Canola	cytosol	55.5	46.71
TraesCSU01G001500.1	Wheat	plasma membrane	49.44	46.06
EES20021	Sorghum	plastid	45.14	45.5
VIT_02s0025g04930.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	37.8	45.23
TraesCS1B01G456000.1	Wheat	cytosol, peroxisome, plasma membrane	41.31	44.81
KXG22628	Sorghum	plastid	45.61	44.55
Zm00001d039314_P001	Maize	plasma membrane	49.6	42.03
OQU87187	Sorghum	plasma membrane	52.63	40.99
KXG31512	Sorghum	plasma membrane	50.4	39.5
VIT_12s0059g00860.t01	Wine grape	peroxisome, plasma membrane, plastid	22.33	36.27
VIT_18s0001g13440.t01	Wine grape	golgi, plasma membrane, vacuole	17.86	35.78

Protein Annotations

Gene3D:1.50.10.150	EntrezGene:100242167	wikigene:100242167	MapMan:24.3.10	ProteinID:CBI22602	ProteinID:CBI22602.3
UniProt:E0CUQ2	EMBL:FN595243	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0006821	GO:GO:0006873	GO:GO:0006950	GO:GO:0008150
GO:GO:0008308	GO:GO:0009414	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0015698
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0055085	GO:GO:0098656	InterPro:IPR038665
EntrezGene:LOC100242167	wikigene:LOC100242167	PFAM:PF03595	PANTHER:PTHR31269	PANTHER:PTHR31269:SF21	InterPro:SLAC/SLAH
TMHMM:TMhelix	UniParc:UPI0001BE2046	ArrayExpress:VIT_16s0050g01860	EnsemblPlantsGene:VIT_16s0050g01860	EnsemblPlants:VIT_16s0050g01860.t01	InterPro:Voltage-dep_anion_channel
InterPro:Voltage-dep_anion_channel_sf	RefSeq:XP_002275623	RefSeq:XP_002275623.2	RefSeq:XP_010662647.1	RefSeq:XP_010662648.1	SEG:seg

Description

No Description!

Coordinates

chr16:+:18793359..18798739

Molecular Weight (calculated)

70426.9 Da

IEP (calculated)

7.905

GRAVY (calculated)

0.040

Length

627 amino acids

Sequence
(BLAST)

001: MEHNEILSST KQDSPEVIPS LIKFIASNEV AGFDSMEDIC SLNNQYQMNG FQPVSLSSEE TEAAAILSQN HVSRPIKSHL ASAISISMPS SPLEVHLQNT
101: KRVLFSDHGE TMFSNGILDS SAACKTASTE LPRQAKFHSQ PMPTGSTYPE AIVGDKFPNQ SESQARNPRI ERLKDKRFDS FKTWSGKLER QLSNLRGKPQ
201: ESELENNTTQ NSEMEILPVD RYFDALEGPE LDTLKASEEL VLPEDKKWPF LLRYPISSFG ICLGMSSQAI MWKTLATSPS MNFLHVSSNV NFSLWCISAA
301: LIAIVSFIYL LKVIFYFEAV RREYYHPIRV NFFFAPWIAF LFLALGVPPS VAEHLPPALW YILMTPVFCF ELKIYGQWMS GGQRRLSKVA NPSNHLSIVG
401: NFVGALLGAS MGLKEGPIFF FAIGLAHYIV LFVTLYQRLP TNATLPKELH PVFFLFVAAP SVASMAWTKI QGSFDYGSRI AYFIALFLYF SLAVRVNFFR
501: GFRFSLAWWA YTFPMTGAAI ATIRYSNEVT NIVTRSLSVT LSAIAILTVT ALLITTILHA FVLQDLFPND IAIAISERRR KTSKKWYHLR TGSSDTKEIE
601: NFLKFGSSDN KDIEASLKPP SCKPEEV

Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)

001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS

Arabidopsis Description

SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.