Factsheet for TraesCS1B01G388600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
golgi 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84361	Canola	plasma membrane	56.57	54.1
GSMUA_Achr9P05400_001	Banana	plastid	61.66	51.57
TraesCS3B01G254700.1	Wheat	cytosol, peroxisome, plasma membrane	83.91	50.57
KRH38307	Soybean	golgi, plasma membrane, plastid	52.55	47.34
Zm00001d044181_P001	Maize	plasma membrane	78.55	46.51
Zm00001d011393_P001	Maize	cytosol, peroxisome, plasma membrane	78.02	45.9
Os01t0623200-01	Rice	cytosol, peroxisome, plasma membrane	79.89	45.29
Bra040840.1-P	Field mustard	plastid	56.3	42.25
CDY29871	Canola	plastid	56.3	42.25
CDX92855	Canola	plastid	56.3	42.17
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	56.3	41.83
TraesCS1B01G455100.1	Wheat	plasma membrane	59.52	41.42
TraesCS3B01G018300.1	Wheat	mitochondrion	60.59	41.32
TraesCS1B01G456500.1	Wheat	plasma membrane	66.22	41.03
TraesCS1B01G456400.1	Wheat	plasma membrane	66.22	41.03
TraesCS1B01G456200.1	Wheat	plasma membrane	68.9	40.92
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	60.86	40.9
TraesCS1B01G456300.1	Wheat	plasma membrane	67.83	40.87
AT4G27970.6	Thale cress	plastid	56.84	40.85
TraesCS1B01G456100.1	Wheat	cytosol, peroxisome, plasma membrane	65.42	40.8
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	64.61	40.3
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	62.47	39.97
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	54.42	39.88
Bra026471.1-P	Field mustard	cytosol, plastid	58.18	38.96
Solyc09g014610.2.1	Tomato	plasma membrane	61.13	38.38
KRH08776	Soybean	cytosol, nucleus, plasma membrane	60.32	37.69
KRH38311	Soybean	cytosol, nucleus, plasma membrane	60.32	37.69
PGSC0003DMT400074359	Potato	plasma membrane	60.32	37.63
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	63.0	37.48
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	61.66	37.34
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	61.13	36.95
TraesCS1B01G456000.1	Wheat	cytosol, peroxisome, plasma membrane	56.57	36.51
OQU87187	Sorghum	plasma membrane	78.55	36.4
TraesCS3B01G178600.1	Wheat	cytosol, peroxisome, plasma membrane	58.45	36.21
KRH35219	Soybean	cytosol	54.42	36.19
KRH08775	Soybean	cytosol, nucleus, plasma membrane	56.3	35.96
TraesCS1B01G147400.1	Wheat	plasma membrane	60.32	35.43
CDX87147	Canola	cytosol, nucleus, plasma membrane	58.45	34.99
CDX80404	Canola	cytosol	59.25	34.75
Bra009724.1-P	Field mustard	cytosol	58.98	34.59
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	58.71	34.49
Bra026294.1-P	Field mustard	plastid	57.1	33.39
Bra029390.1-P	Field mustard	cytosol	57.1	33.28
CDX89215	Canola	plastid	56.84	33.28
CDY19015	Canola	plastid	56.84	33.28
Bra010388.1-P	Field mustard	plastid	56.84	32.72
CDY14262	Canola	plastid	56.57	32.56
TraesCS2B01G416100.1	Wheat	plastid	50.13	32.24
CDY44267	Canola	cytosol	52.55	31.92
TraesCS3B01G199200.1	Wheat	plasma membrane	33.24	31.71
CDY46973	Canola	cytosol	52.28	31.55
CDX88065	Canola	cytosol	58.71	29.4

Protein Annotations

EnsemblPlants:TraesCS1B01G388600.1	EnsemblPlantsGene:TraesCS1B01G388600	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF12	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:622364953..622367139

Molecular Weight (calculated)

41595.3 Da

IEP (calculated)

10.307

GRAVY (calculated)

0.451

Length

373 amino acids

Sequence
(BLAST)

001: MVLGVSSQGI LWKMLAWAPP SAFLHVSLLL PHVLWYISLA LMALVSSIYL LKLVFYFEAV RREFHHPIRA NFFFAPWIAC LFLMQGTPRD MAKIHPAAWY
101: ALMAPIFCLQ LKIYSQWMSG GQRRLSKVAN PSNHLSIAGN FVGTLLGAKM GLREGPVFFF AVGLAHYSVL FVTLYQRLPT NITLPKELYP VFFLFVAAPS
201: VASMAWAQIN GEFDNGAQVT FFIALFLYMP LAVRINFFRG FRFSLAWWAY TFPMTGVSIA TITYATEVNN VLTRTLSIGL SGVATVTVAG LLVTTMLHAF
301: VLRDLFPNDV SIAITQRKPK FSKMLAHLRS SSSDMKELVL SVSKSPNSDS HESAAGDRSR ETHLSVHKGN AEP

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.