Factsheet for TraesCS3B01G254700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G228400.1	Wheat	cytosol, nucleus, plasma membrane	97.25	95.86
TraesCS3A01G225100.1	Wheat	plasma membrane	95.31	86.64
TraesCS1B01G388600.1	Wheat	plasma membrane	50.57	83.91
Os01t0623200-01	Rice	cytosol, peroxisome, plasma membrane	80.45	75.68
Zm00001d044181_P001	Maize	plasma membrane	76.9	75.56
Zm00001d011393_P001	Maize	cytosol, peroxisome, plasma membrane	76.41	74.61
GSMUA_Achr9P05400_001	Banana	plastid	48.14	66.82
TraesCS1B01G456300.1	Wheat	plasma membrane	62.2	62.2
OQU87187	Sorghum	plasma membrane	80.61	61.99
TraesCS1B01G455100.1	Wheat	plasma membrane	53.47	61.75
CDX84361	Canola	plasma membrane	38.13	60.51
TraesCS1B01G456200.1	Wheat	plasma membrane	60.58	59.71
TraesCS3B01G018300.1	Wheat	mitochondrion	52.34	59.23
TraesCS1B01G456500.1	Wheat	plasma membrane	56.7	58.31
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	56.22	58.19
TraesCS1B01G456400.1	Wheat	plasma membrane	56.22	57.81
KRH38307	Soybean	golgi, plasma membrane, plastid	38.45	57.49
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	47.17	57.37
TraesCS1B01G456100.1	Wheat	cytosol, peroxisome, plasma membrane	55.09	57.02
CDY29871	Canola	plastid	45.23	56.34
Bra040840.1-P	Field mustard	plastid	45.23	56.34
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	50.08	55.86
CDX92855	Canola	plastid	44.91	55.82
TraesCS1B01G456000.1	Wheat	cytosol, peroxisome, plasma membrane	51.53	55.19
KRH38311	Soybean	cytosol, nucleus, plasma membrane	52.34	54.27
KRH08776	Soybean	cytosol, nucleus, plasma membrane	52.34	54.27
AT4G27970.6	Thale cress	plastid	45.07	53.76
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	50.57	53.69
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	43.3	53.39
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	53.96	53.27
Solyc09g014610.2.1	Tomato	plasma membrane	50.57	52.69
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	51.86	52.11
Bra026471.1-P	Field mustard	cytosol, plastid	46.2	51.35
KRH08775	Soybean	cytosol, nucleus, plasma membrane	47.66	50.51
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	50.24	50.41
PGSC0003DMT400074359	Potato	plasma membrane	48.63	50.33
TraesCS3B01G178600.1	Wheat	cytosol, peroxisome, plasma membrane	48.3	49.67
TraesCS1B01G147400.1	Wheat	plasma membrane	50.24	48.98
KRH35219	Soybean	cytosol	43.46	47.95
CDX87147	Canola	cytosol, nucleus, plasma membrane	47.33	47.03
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	48.14	46.93
CDX80404	Canola	cytosol	47.82	46.54
Bra009724.1-P	Field mustard	cytosol	47.66	46.38
Bra029390.1-P	Field mustard	cytosol	46.85	45.31
CDY44267	Canola	cytosol	43.62	43.97
CDY46973	Canola	cytosol	43.78	43.85
CDY19015	Canola	plastid	44.59	43.33
Bra026294.1-P	Field mustard	plastid	44.43	43.1
CDX89215	Canola	plastid	44.1	42.86
Bra010388.1-P	Field mustard	plastid	44.26	42.28
CDY14262	Canola	plastid	43.94	41.98
TraesCS2B01G416100.1	Wheat	plastid	39.1	41.72
CDX88065	Canola	cytosol	47.82	39.73
TraesCS3B01G199200.1	Wheat	plasma membrane	23.59	37.34

Protein Annotations

EnsemblPlants:TraesCS3B01G254700.1	EnsemblPlantsGene:TraesCS3B01G254700	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF12	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:410773681..410775744

Molecular Weight (calculated)

68516.8 Da

IEP (calculated)

9.649

GRAVY (calculated)

0.088

Length

619 amino acids

Sequence
(BLAST)

001: MELSNKDVQI QMGSQLGEQS SREGLPSLLI QVPSRTIAGF DCVGRDAVSP AALNERNNKD TVISIQAPAT PPAAAPVRAY DDTQIPYSLS LSMPASPSGL
101: HFSQFRAASV RRNEARAAVA PSDAKQAEAQ SPRLLQQTRF HSQPILHASQ INDGTRRADS TRDKRFDPFK TFSGRLERQL SNLRGRPLDP MDLGSHHSKI
201: SEETDQVPGT DRYFDALEGP ELDTLRATEV PVLPNDEKWP FLLRFPISAF GMVLGVSSQA ILWKTLASAP PTAFLHVSLV VAHALWYISL ALMGLVSCIY
301: LLKIVFYFEA VRREFYHPIR ANFFFAPWIA CLFLVQGAPR ELAEVHHGVW YMLMAPIFCL ELKIYGQWMS GGQRRLSKVA NPSNHLSIVG NFVGALLGAK
401: MGIREGPIFF FAIGLAHYIV LFVTLYQRLP TNVTLPKELH PVFFLFVAAP SVASMAWAKI NGEFDNGARI AYFIALFLYM SLAVRINFFR GFRFSLAWWA
501: YTFPMTGASI ATITYATEVT NVLTRTLSIG LSGIATVTVA GLLVTTMFHA FVLRDLFPND VSIAITRRKP KFSKILAHFR SSSSDMKELV LSVSKSPNTD
601: SDSSLTDTDP SVTKGKAEP

Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)

001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS

Arabidopsis Description

SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.