CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044181_P001	Maize	plasma membrane	67.95	86.83
Zm00001d011393_P001	Maize	cytosol, peroxisome, plasma membrane	66.46	84.38
TraesCS3B01G254700.1	Wheat	cytosol, peroxisome, plasma membrane	61.99	80.61
TraesCS1B01G388600.1	Wheat	plasma membrane	36.4	78.55
TraesCS3D01G228400.1	Wheat	cytosol, nucleus, plasma membrane	61.12	78.34
Os01t0623200-01	Rice	cytosol, peroxisome, plasma membrane	61.74	75.53
TraesCS3A01G225100.1	Wheat	plasma membrane	62.24	73.57
GSMUA_Achr9P05400_001	Banana	plastid	37.02	66.82
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	39.5	61.63
CDX84361	Canola	plasma membrane	29.69	61.28
EES20021	Sorghum	plastid	46.46	60.13
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	44.1	59.36
OQU77336	Sorghum	cytosol	38.26	58.56
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	36.4	57.56
KXG22628	Sorghum	plastid	45.71	57.32
CDY29871	Canola	plastid	35.03	56.74
Bra040840.1-P	Field mustard	plastid	34.91	56.54
CDX92855	Canola	plastid	34.91	56.43
KRH38307	Soybean	golgi, plasma membrane, plastid	28.82	56.04
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	38.26	55.5
AT4G27970.6	Thale cress	plastid	35.16	54.53
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	33.66	53.98
KRH08776	Soybean	cytosol, nucleus, plasma membrane	39.75	53.6
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	38.63	53.34
Solyc09g014610.2.1	Tomato	plasma membrane	38.88	52.69
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	40.99	52.63
KRH38311	Soybean	cytosol, nucleus, plasma membrane	39.01	52.6
Bra026471.1-P	Field mustard	cytosol, plastid	35.53	51.35
KXG28459	Sorghum	cytosol, peroxisome, plasma membrane	33.54	51.33
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	39.25	51.3
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	38.76	50.57
OQU77636	Sorghum	cytosol, peroxisome, plasma membrane	39.38	50.48
PGSC0003DMT400074359	Potato	plasma membrane	37.39	50.33
KRH08775	Soybean	cytosol, nucleus, plasma membrane	35.9	49.49
KRH35219	Soybean	cytosol	33.54	48.13
CDX87147	Canola	cytosol, nucleus, plasma membrane	36.27	46.87
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	37.27	46.58
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	36.52	46.3
CDX80404	Canola	cytosol	36.52	46.23
Bra009724.1-P	Field mustard	cytosol	36.4	46.07
Bra029390.1-P	Field mustard	cytosol	35.9	45.16
CDY19015	Canola	plastid	34.91	44.11
Bra026294.1-P	Field mustard	plastid	34.78	43.89
CDY46973	Canola	cytosol	33.54	43.69
CDX89215	Canola	plastid	34.53	43.64
CDY44267	Canola	cytosol	33.17	43.49
Bra010388.1-P	Field mustard	plastid	34.66	43.06
CDY14262	Canola	plastid	34.29	42.59
OQU82188	Sorghum	plastid	32.55	40.12
KXG31512	Sorghum	plasma membrane	39.5	39.75
CDX88065	Canola	cytosol	36.52	39.46
EER99979	Sorghum	plastid	18.39	35.24

Protein Annotations

EnsemblPlants:OQU87187	EnsemblPlantsGene:SORBI_3003G225600	EntrezGene:8054905	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel
InterPro:Voltage-dep_anion_channel_sf	PANTHER:PTHR31269	PANTHER:PTHR31269:SF12	PFAM:PF03595	ProteinID:OQU87187	ProteinID:OQU87187.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0009DC9253	UniProt:A0A1W0VYI7	MapMan:24.3.10	:

Description

hypothetical protein

Coordinates

chr3:-:56145619..56150218

Molecular Weight (calculated)

87451.7 Da

IEP (calculated)

8.712

GRAVY (calculated)

0.182

Length

805 amino acids

Sequence
(BLAST)

001: MAPGSADSGG ISVECRIPFF VFPLRKKGNS ALGSSLGLLA VYINSYSSSS YSPGKVISKQ LIPASFLRFS TRPAGPVLCC WLLLLPVVGY HLIISLAAST
101: PLRSPADHVQ LETSRARGRP SCGATLAAQL VTLMKHQGAL SLGTMEFVSS KDVQMAGLNT ELSSREDDAL PALLIKVPSQ TIAGFDCVVG ADDATVSLDE
201: LDDKVAEELH QQGSGSTNTD IVISIPAAAP AASAPPPPPR VVVAPAARAY DDDAHVVPYS VSLSMPASPS GFHLSQFMCA DRRARVAPPD DDAHRHPVAV
301: EGQQMVEGPH SPRLIKQTRF HSQPILNLHP SSSKNVVADG SSTRDKRFDP FKTFSGRLER QLSNLRGRPQ EPIDGVSPDS KISEEETDQV PAADRYFDAL
401: EGPELDTLRA TEVPVLPKDE KWPFLLRFPI SAFGMCLGVS SQAILWKTLA SAPPTAFLHV SPVVSHALWY VALALMLLVS VIYLLKVVFY FEAVRREFYH
501: PIRANFFFAP WIACLFLVLG APRLVAEMHH GVWYAVMAPI FCLELKIYGQ WMSGGQRRLS KVANPSNHLS IVGNFVGALL GAKMGLREGP IFFFAVGLAH
601: YMVLFVTLYQ RLPTNVTLPK ELHPVFFLFV AAPSVASMAW AKINGQFDAG ARIAYFIALF LYMSLAVRIN FFRGFRFSLA WWAYTFPMTG ASVATITYAT
701: EVTNVLTRAL SIGLSGISTV TVAGLLVTTV FHAFVLRDLF PNDVSIAITR KKPKFSKILA HFRSSSSDMK ELVFSLSSNS KTAAQSDSGD TDSDPSVTAK
801: SRAEP

Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)

001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS

Arabidopsis Description

SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.