CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010430_P001	Maize	plasma membrane	46.66	89.6
Zm00001d037816_P001	Maize	plasma membrane	84.87	83.81
Os01t0385400-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	75.16	75.52
KXG28459	Sorghum	cytosol, peroxisome, plasma membrane	57.01	68.06
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	43.15	67.41
CDX84361	Canola	plasma membrane	39.17	63.08
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	59.87	58.39
CDX92855	Canola	plastid	45.7	57.63
KRH38307	Soybean	golgi, plasma membrane, plastid	37.58	57.0
CDY29871	Canola	plastid	45.06	56.94
Bra040840.1-P	Field mustard	plastid	45.06	56.94
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	44.43	55.58
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	50.32	54.2
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	47.13	53.33
AT4G27970.6	Thale cress	plastid	43.95	53.18
Bra026471.1-P	Field mustard	cytosol, plastid	47.13	53.14
PGSC0003DMT400074359	Potato	plasma membrane	50.16	52.68
KRH08776	Soybean	cytosol, nucleus, plasma membrane	49.68	52.26
KRH38311	Soybean	cytosol, nucleus, plasma membrane	49.52	52.09
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	50.96	51.95
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	51.59	51.67
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	50.0	50.89
Solyc09g014610.2.1	Tomato	plasma membrane	47.61	50.34
GSMUA_Achr7P14260_001	Banana	cytosol	47.45	50.0
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	40.92	49.81
KRH08775	Soybean	cytosol, nucleus, plasma membrane	45.54	48.97
KRH35219	Soybean	cytosol	43.63	48.84
CDX87147	Canola	cytosol, nucleus, plasma membrane	48.25	48.64
CDX80404	Canola	cytosol	48.89	48.27
OQU77336	Sorghum	cytosol	40.29	48.1
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	48.57	48.03
Bra009724.1-P	Field mustard	cytosol	48.57	47.96
Bra029390.1-P	Field mustard	cytosol	47.13	46.25
KXG31512	Sorghum	plasma membrane	58.92	46.25
EES20021	Sorghum	plastid	45.38	45.82
CDY44267	Canola	cytosol	44.11	45.11
CDY46973	Canola	cytosol	44.27	44.98
KXG22628	Sorghum	plastid	45.22	44.24
CDY19015	Canola	plastid	44.11	43.49
Bra026294.1-P	Field mustard	plastid	44.11	43.42
CDX89215	Canola	plastid	43.95	43.33
CDY14262	Canola	plastid	44.27	42.9
Bra010388.1-P	Field mustard	plastid	44.27	42.9
CDX88065	Canola	cytosol	48.73	41.07
OQU87187	Sorghum	plasma membrane	50.48	39.38
OQU82188	Sorghum	plastid	37.1	35.68
EER99979	Sorghum	plastid	22.61	33.81

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	EntrezGene:8066616	UniProt:C5YUS9	ProteinID:EES17890.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0006810	GO:GO:0006873	GO:GO:0008150
GO:GO:0008308	GO:GO:0009987	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725
GO:GO:0055085	GO:GO:0098656	InterPro:IPR038665	ProteinID:OQU77634.1	ProteinID:OQU77635.1	EnsemblPlants:OQU77636
ProteinID:OQU77636	ProteinID:OQU77636.1	ProteinID:OQU77637.1	PFAM:PF03595	PANTHER:PTHR31269	PANTHER:PTHR31269:SF2
InterPro:SLAC/SLAH	EnsemblPlantsGene:SORBI_3009G081700	TMHMM:TMhelix	UniParc:UPI0001A88A40	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
RefSeq:XP_002439460.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:11630988..11646147

Molecular Weight (calculated)

68626.7 Da

IEP (calculated)

8.734

GRAVY (calculated)

0.045

Length

628 amino acids

Sequence
(BLAST)

001: MEDDANSKTH RAVPSLLADV EISDLAGFDV TPTPSPHAHD APTPTPSPRP PKNPSRPGVP PLDRVTRRSE VVLPPLDSPF QAPGYRSVQP VSISLPSSPS
101: GFGVPAGAAG DSADGLRRQA LLANAAAARE PQPQMPPPPP ARENGARSTH QPDKVVFRSQ PIPGGHPPRA GSRTARVASR VISRDKRYDS FKTFSGKLER
201: QLTHLAGAPE VHEEEEEDNV IATTSRTASM PKVDRFFAAL EGPELDKLKS SEELVLPSDK TWPFLLRFPV SAFGMCLGVS SQAILWKTIA SSSPTMFLHV
301: THKVNLVLWC ISVVLMCAIT AVYALKVAFF FEAVRREYYH PIRVNFFFAP WIACLFLVIG VPPSVAREPL PQWLWYALMA PVLTLELKIY GQWMSGGQRR
401: LSKVANPSNH LSVVGNFVGA LLGASMGLKE GPVFFFSVGL AHYTVLFVTL YQRLPTNETL PKELHPVFFL FVAAPSVASM ALAKLTGEFG FGPRVAYFIA
501: MFLYASLAVR INFFRGFRFS LAWWAYTFPM TGAAIASIRY STEVDNAFTQ TLCVALSAVA VLTVTALFVT TLVHAFVLRN LFPNDICIAI TDHKMKPIVE
601: LQESPSADGS TNSNDNDNDI EAGDRGKQ

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.