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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 98.21 76.29
CDX92855 Canola plastid 86.67 67.87
CDY29871 Canola plastid 85.38 67.0
Zm00001d010430_P001 Maize plasma membrane 53.85 64.22
AT4G27970.6 Thale cress plastid 84.62 63.58
TraesCSU01G204200.1 Wheat plasma membrane 38.46 56.82
TraesCS1B01G388600.1 Wheat plasma membrane 54.1 56.57
CDY14262 Canola plastid 92.05 55.4
CDX89215 Canola plastid 86.15 52.75
GSMUA_Achr5P06840_001 Banana cytosol, endoplasmic reticulum, peroxisome 54.36 52.74
CDY19015 Canola plastid 85.9 52.59
GSMUA_Achr9P05400_001 Banana plastid 54.87 47.98
TraesCS1A01G423900.1 Wheat plasma membrane 57.95 44.84
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 57.18 42.4
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 57.44 42.11
Zm00001d009706_P001 Maize cytosol, peroxisome, plasma membrane 55.64 41.81
KXG22629 Sorghum cytosol, peroxisome, plasma membrane 54.62 41.28
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 53.85 41.26
OQU77336 Sorghum cytosol 55.64 41.25
TraesCS1B01G455100.1 Wheat plasma membrane 56.41 41.04
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 56.67 40.93
CDX87147 Canola cytosol, nucleus, plasma membrane 65.13 40.77
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 62.05 40.47
TraesCS3B01G018300.1 Wheat mitochondrion 56.67 40.4
TraesCS1D01G432800.1 Wheat plasma membrane 59.49 40.0
CDX80404 Canola cytosol 64.87 39.78
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 19.49 39.38
TraesCS1D01G433100.1 Wheat plasma membrane 59.23 39.35
Os05t0219900-01 Rice cytosol, peroxisome, plasma membrane, plastid 62.56 39.23
Os01t0385400-01 Rice cytosol, endoplasmic reticulum, plasma membrane 62.82 39.2
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 63.08 39.17
TraesCS1B01G456400.1 Wheat plasma membrane 59.74 38.7
Zm00001d009705_P001 Maize plasma membrane 56.67 38.7
TraesCS1A01G424500.1 Wheat plasma membrane 59.23 38.69
TraesCS1D01G126500.1 Wheat cytosol, peroxisome, plasma membrane 59.74 38.58
TraesCSU01G001600.1 Wheat plasma membrane 60.26 38.52
TraesCS3D01G159600.1 Wheat cytosol, peroxisome, plasma membrane 59.49 38.47
TraesCS1D01G433200.1 Wheat plasma membrane 60.77 38.41
TraesCS1B01G456500.1 Wheat plasma membrane 59.23 38.37
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 58.46 38.32
TraesCS1B01G456200.1 Wheat plasma membrane 61.54 38.22
TraesCS3B01G178600.1 Wheat cytosol, peroxisome, plasma membrane 58.97 38.21
TraesCS3B01G254700.1 Wheat cytosol, peroxisome, plasma membrane 60.51 38.13
Zm00001d037816_P001 Maize plasma membrane 62.05 38.05
TraesCS3A01G151400.1 Wheat cytosol, peroxisome, plasma membrane 58.97 37.95
TraesCS1D01G432900.1 Wheat plasma membrane 60.26 37.84
TraesCS1B01G456300.1 Wheat plasma membrane 60.0 37.8
Zm00001d044181_P001 Maize plasma membrane 61.03 37.78
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 55.38 37.76
CDY19522 Canola endoplasmic reticulum 19.23 37.69
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 57.69 37.63
TraesCS3D01G228400.1 Wheat cytosol, nucleus, plasma membrane 60.51 37.58
Zm00001d011393_P001 Maize cytosol, peroxisome, plasma membrane 61.03 37.54
TraesCSU01G001400.1 Wheat plasma membrane, plastid 60.0 37.26
TraesCS1D01G432500.1 Wheat plasma membrane 58.46 37.19
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 57.44 37.15
Zm00001d041653_P001 Maize plastid 56.92 37.0
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 19.23 36.95
TraesCS1B01G147400.1 Wheat plasma membrane 60.0 36.85
CDY44267 Canola cytosol 57.95 36.81
GSMUA_Achr7P14260_001 Banana cytosol 56.15 36.74
CDY46973 Canola cytosol 57.95 36.57
Os01t0623200-01 Rice cytosol, peroxisome, plasma membrane 61.54 36.47
Zm00001d039150_P001 Maize plasma membrane 55.9 36.21
EES20021 Sorghum plastid 57.69 36.17
CDX98059 Canola cytosol, peroxisome, plastid 51.28 36.04
Os07t0181100-01 Rice cytosol, peroxisome, plasma membrane 57.18 35.74
TraesCSU01G001500.1 Wheat plasma membrane 61.28 35.51
TraesCS1A01G127500.1 Wheat plasma membrane 59.23 35.38
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 57.95 35.09
Os01t0226600-02 Rice endoplasmic reticulum, peroxisome, plasma membrane 58.97 35.06
KXG22628 Sorghum plastid 57.44 34.89
TraesCS3A01G225100.1 Wheat plasma membrane 60.77 34.8
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 51.54 34.78
CDY30084 Canola plasma membrane 51.28 34.13
CDX88065 Canola cytosol 64.36 33.69
CDY24881 Canola extracellular 15.64 31.77
CDY12936 Canola plasma membrane 30.77 31.5
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 31.03 31.27
CDY03280 Canola plasma membrane 31.28 31.12
Zm00001d039314_P001 Maize plasma membrane 58.72 30.95
CDY08628 Canola golgi, peroxisome, plasma membrane 30.0 30.23
OQU87187 Sorghum plasma membrane 61.28 29.69
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 6.15 29.27
KXG31512 Sorghum plasma membrane 59.49 29.0
CDY12934 Canola cytosol, extracellular, plasma membrane 6.67 18.98
CDY08625 Canola plasma membrane 9.74 18.91
CDY19523 Canola cytosol, extracellular, plasma membrane 6.15 18.9
CDX97407 Canola cytosol 2.56 6.76
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:A0A078D4W5EnsemblPlants:CDX84361ProteinID:CDX84361ProteinID:CDX84361.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0006810GO:GO:0006873
GO:GO:0008150GO:GO:0008308GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0019725
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00141503001InterPro:IPR038665PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF2
InterPro:SLAC/SLAHTMHMM:TMhelixUniParc:UPI0004EEBE2EInterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg
Description
BnaC03g51390D
Coordinates
chrLK031837:+:302118..303943
Molecular Weight (calculated)
43826.3 Da
IEP (calculated)
10.089
GRAVY (calculated)
0.576
Length
390 amino acids
Sequence
(BLAST)
001: MEKIVLPEDK TWPFLLRFPV TSFGMCLGVS SQAIMWKTLA TTKAEKFLHL TQVVNHVLWW ISLVLLLSFS ITYLFKTIFF FEAVRREFKH PIRVNFFFAP
101: LISVLFLALG IPHSITSNLP SMLWYFLMAP VLFLEMKIYG QWMSGGQRRL SKVANPTNHL SIVGNFAGAL LGASLGLKEG PMFFFSVGLA YYLVLFVTLY
201: QRLPTNETLP KELHPVFFLF VAAPAVASMA WTTISASFDI GSRIAYFISL FLYFSLVVRI NFFRGFKFSL AWWAYTFPMT AVATATIKYS GEVNGLATQI
301: LAVLMSGAAT LTVIGVLVLT VVHAFVKRDL FPNDFAIAIS AEQPKQKKWL KQLINGSLEN STRGLKVLDP EDTRIDIEAP PLSNAVCHTV
Best Arabidopsis Sequence Match ( AT4G27970.5 )
(BLAST)
001: MCLGVSSQAI MWKTLATTEA EKFLHVTQVI NHVLWWISLL LLLAVSITYL FKTILFFEAV RREFRHPIRV NFFFAPLISI LFLALGIPHS IISHLPSTLW
101: YFLMAPILFL EMKIYGQWMS GGQRRLSKVA NPTNHLSIVG NFAGALLGAS MGLKEGPIFF FAIGLAYYLV LFVTLYQRLP TNETLPKELH PVFFLFVAAP
201: AVASMAWTKI SASFDLGSRL AYFISLFLYF SLVCRINLFR GFKFSLAWWA YTFPMTAVAS ATIKYSDEVT GVATKILSVV MSGAATLTVI AVLGLTVMHA
301: FVQRDLFPND VVIAISAEQP KQKRWFKHLT KESYGNNERC PKILDPEDNQ IDLESPPLVN VDSSTVQNSN
Arabidopsis Description
SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.