Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- plastid 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G001400.1 | Wheat | plasma membrane, plastid | 94.66 | 87.42 |
| TraesCS1D01G432900.1 | Wheat | plasma membrane | 92.93 | 86.8 |
| TraesCS1D01G433200.1 | Wheat | plasma membrane | 87.41 | 82.17 |
| HORVU1Hr1G092640.3 | Barley | mitochondrion | 90.52 | 79.79 |
| TraesCS1D01G433100.1 | Wheat | plasma membrane | 78.1 | 77.17 |
| TraesCS1D01G432500.1 | Wheat | plasma membrane | 74.83 | 70.8 |
| TraesCS1D01G432700.1 | Wheat | cytosol, peroxisome, plasma membrane | 73.28 | 70.48 |
| TraesCS3D01G017800.1 | Wheat | mitochondrion, plasma membrane | 70.86 | 69.08 |
| Zm00001d009705_P001 | Maize | plasma membrane | 65.52 | 66.55 |
| Zm00001d009706_P001 | Maize | cytosol, peroxisome, plasma membrane | 58.79 | 65.7 |
| KXG22629 | Sorghum | cytosol, peroxisome, plasma membrane | 57.41 | 64.53 |
| Zm00001d039150_P001 | Maize | plasma membrane | 66.21 | 63.79 |
| EES20021 | Sorghum | plastid | 67.59 | 63.02 |
| OQU77336 | Sorghum | cytosol | 56.38 | 62.17 |
| KXG22628 | Sorghum | plastid | 65.86 | 59.5 |
| CDX84361 | Canola | plasma membrane | 40.0 | 59.49 |
| GSMUA_Achr9P05400_001 | Banana | plastid | 44.66 | 58.07 |
| TraesCS3D01G228400.1 | Wheat | cytosol, nucleus, plasma membrane | 61.03 | 56.37 |
| CDY29871 | Canola | plastid | 46.03 | 53.72 |
| Bra040840.1-P | Field mustard | plastid | 46.03 | 53.72 |
| CDX92855 | Canola | plastid | 46.03 | 53.61 |
| KRH38307 | Soybean | golgi, plasma membrane, plastid | 37.76 | 52.9 |
| AT4G27970.6 | Thale cress | plastid | 46.55 | 52.02 |
| CDX97408 | Canola | cytosol, peroxisome, plasma membrane, plastid | 45.0 | 51.99 |
| GSMUA_Achr4P15620_001 | Banana | cytosol, peroxisome, plasma membrane | 45.17 | 51.47 |
| GSMUA_Achr6P31880_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 52.59 | 51.0 |
| PGSC0003DMT400021864 | Potato | cytosol, peroxisome, plastid | 48.79 | 50.99 |
| KRH08776 | Soybean | cytosol, nucleus, plasma membrane | 50.34 | 48.91 |
| KRH38311 | Soybean | cytosol, nucleus, plasma membrane | 50.0 | 48.58 |
| Solyc03g007770.2.1 | Tomato | cytosol, nucleus, plasma membrane | 48.62 | 48.37 |
| TraesCS1D01G126500.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.34 | 48.34 |
| Bra026471.1-P | Field mustard | cytosol, plastid | 46.03 | 47.94 |
| Solyc09g014610.2.1 | Tomato | plasma membrane | 48.79 | 47.64 |
| KRH08775 | Soybean | cytosol, nucleus, plasma membrane | 47.93 | 47.6 |
| VIT_16s0050g01860.t01 | Wine grape | cytosol, nucleus, plasma membrane | 51.38 | 47.53 |
| PGSC0003DMT400074359 | Potato | plasma membrane | 48.62 | 47.16 |
| TraesCS3D01G159600.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.62 | 46.77 |
| PGSC0003DMT400051388 | Potato | cytosol, nucleus, plasma membrane | 49.14 | 46.27 |
| Solyc06g036440.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 48.97 | 46.03 |
| KRH35219 | Soybean | cytosol | 44.14 | 45.63 |
| CDX87147 | Canola | cytosol, nucleus, plasma membrane | 47.24 | 43.98 |
| AT5G24030.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 47.07 | 42.99 |
| CDX80404 | Canola | cytosol | 47.07 | 42.92 |
| Bra009724.1-P | Field mustard | cytosol | 47.07 | 42.92 |
| Bra029390.1-P | Field mustard | cytosol | 47.07 | 42.66 |
| CDY44267 | Canola | cytosol | 44.14 | 41.69 |
| CDY19015 | Canola | plastid | 45.69 | 41.6 |
| Bra026294.1-P | Field mustard | plastid | 45.69 | 41.54 |
| CDX89215 | Canola | plastid | 45.52 | 41.44 |
| CDY46973 | Canola | cytosol | 43.97 | 41.26 |
| Bra010388.1-P | Field mustard | plastid | 45.69 | 40.9 |
| CDY14262 | Canola | plastid | 45.52 | 40.74 |
| TraesCS2D01G395700.1 | Wheat | plastid | 39.48 | 39.15 |
| TraesCS3D01G174800.1 | Wheat | plasma membrane | 25.86 | 38.56 |
| CDX88065 | Canola | cytosol | 47.24 | 36.78 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G432800.1 | EnsemblPlantsGene:TraesCS1D01G432800 | Gene3D:1.50.10.150 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR038665 | InterPro:Voltage-dep_anion_channel | InterPro:Voltage-dep_anion_channel_sf |
| PANTHER:PTHR31269 | PANTHER:PTHR31269:SF6 | PFAM:PF03595 | SEG:seg | TIGR:cd09323 | TMHMM:TMhelix |
| MapMan:24.3.10 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:482323437..482325945
Molecular Weight (calculated)
63981.7 Da
IEP (calculated)
8.662
GRAVY (calculated)
0.252
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGCAPSPEP LLLRVPSLAA GVSSMEAADA VVSGGRTTKE AAAASYAETT SSVLISVPSM PPVVRANKAD VSAPAVPLSE SMVERVHHPA VPQLLKQARH
101: HSQPSLVVRV GGEVPAVLRS DSMRERDRRF DHFKTFSGRL QRQLSSLRGV PQDTDVEQVA ASKISEEDTD EDDAVPTADR YFAALEGPEL ETLRSTEVAV
201: LPKDETWPFL LRFPISAFGM CLGVSSQAML WKTLESEPST NFLHVHPAAN HVLWWISVTL MVVVSITYLL KVVFYFEAVR REFHHPVRVN FFFAPSIACL
301: FLVKGVPHPV WEIHHVVWYL LMLPILCLDL KIYGQWMSSG ERRLSKVANP SNHLAVVGNF VGALLGARMG LRELPIFFFG VGLAHYAVLF VTLYQRLPTN
401: VQLPKELHPV FFLFVAAPSV ASMAWARISG EFNDGAKLLY FISLFLYVSL VVRVNLFRGF RFSLAWWAYT FPMTSVALAT VLYASEVDNV LTRSLAVGLS
501: GIAVVTVTGV LATTMYHAFL RKDLFPNDVS IAITRQRPKF SKILAHLRSS SSDVKELVLS IPNLSSSSKQ GAYCNDASSN
101: HSQPSLVVRV GGEVPAVLRS DSMRERDRRF DHFKTFSGRL QRQLSSLRGV PQDTDVEQVA ASKISEEDTD EDDAVPTADR YFAALEGPEL ETLRSTEVAV
201: LPKDETWPFL LRFPISAFGM CLGVSSQAML WKTLESEPST NFLHVHPAAN HVLWWISVTL MVVVSITYLL KVVFYFEAVR REFHHPVRVN FFFAPSIACL
301: FLVKGVPHPV WEIHHVVWYL LMLPILCLDL KIYGQWMSSG ERRLSKVANP SNHLAVVGNF VGALLGARMG LRELPIFFFG VGLAHYAVLF VTLYQRLPTN
401: VQLPKELHPV FFLFVAAPSV ASMAWARISG EFNDGAKLLY FISLFLYVSL VVRVNLFRGF RFSLAWWAYT FPMTSVALAT VLYASEVDNV LTRSLAVGLS
501: GIAVVTVTGV LATTMYHAFL RKDLFPNDVS IAITRQRPKF SKILAHLRSS SSDVKELVLS IPNLSSSSKQ GAYCNDASSN
001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN
Arabidopsis Description
SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.