Factsheet for TraesCS3D01G228400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G254700.1	Wheat	cytosol, peroxisome, plasma membrane	95.86	97.25
TraesCS3A01G225100.1	Wheat	plasma membrane	96.02	88.55
Os01t0623200-01	Rice	cytosol, peroxisome, plasma membrane	78.82	75.23
Zm00001d044181_P001	Maize	plasma membrane	74.36	74.13
Zm00001d011393_P001	Maize	cytosol, peroxisome, plasma membrane	74.04	73.34
GSMUA_Achr9P05400_001	Banana	plastid	47.29	66.59
TraesCS1D01G433200.1	Wheat	plasma membrane	60.83	61.91
OQU87187	Sorghum	plasma membrane	78.34	61.12
TraesCS1D01G432800.1	Wheat	plasma membrane	56.37	61.03
CDX84361	Canola	plasma membrane	37.58	60.51
TraesCS1D01G433100.1	Wheat	plasma membrane	55.89	59.8
TraesCS1D01G432900.1	Wheat	plasma membrane	58.92	59.58
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	55.25	58.03
KRH38307	Soybean	golgi, plasma membrane, plastid	38.06	57.73
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	46.34	57.17
TraesCS1D01G432700.1	Wheat	cytosol, peroxisome, plasma membrane	54.62	56.88
CDY29871	Canola	plastid	44.59	56.34
Bra040840.1-P	Field mustard	plastid	44.59	56.34
TraesCS1D01G432500.1	Wheat	plasma membrane	54.94	56.28
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	49.36	55.86
CDX92855	Canola	plastid	44.27	55.82
TraesCS3D01G017800.1	Wheat	mitochondrion, plasma membrane	52.55	55.46
KRH38311	Soybean	cytosol, nucleus, plasma membrane	51.91	54.61
KRH08776	Soybean	cytosol, nucleus, plasma membrane	51.91	54.61
AT4G27970.6	Thale cress	plastid	44.43	53.76
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	49.84	53.69
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	42.68	53.39
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	52.87	52.95
Solyc09g014610.2.1	Tomato	plasma membrane	49.68	52.53
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	50.96	51.95
TraesCS1D01G126500.1	Wheat	cytosol, peroxisome, plasma membrane	49.2	51.16
Bra026471.1-P	Field mustard	cytosol, plastid	45.06	50.81
KRH08775	Soybean	cytosol, nucleus, plasma membrane	47.13	50.68
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	49.52	50.41
PGSC0003DMT400074359	Potato	plasma membrane	47.93	50.33
TraesCS3D01G159600.1	Wheat	cytosol, peroxisome, plasma membrane	47.61	49.59
KRH35219	Soybean	cytosol	43.47	48.66
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	47.45	46.93
CDX87147	Canola	cytosol, nucleus, plasma membrane	46.18	46.55
CDX80404	Canola	cytosol	46.66	46.07
Bra009724.1-P	Field mustard	cytosol	46.5	45.91
Bra029390.1-P	Field mustard	cytosol	45.86	45.0
CDY44267	Canola	cytosol	42.68	43.65
CDY46973	Canola	cytosol	42.83	43.53
CDY19015	Canola	plastid	43.95	43.33
Bra026294.1-P	Field mustard	plastid	43.79	43.1
CDX89215	Canola	plastid	43.47	42.86
Bra010388.1-P	Field mustard	plastid	43.63	42.28
CDY14262	Canola	plastid	43.31	41.98
TraesCS2D01G395700.1	Wheat	plastid	38.69	41.54
CDX88065	Canola	cytosol	46.66	39.33
TraesCS3D01G174800.1	Wheat	plasma membrane	22.77	36.76

Protein Annotations

EnsemblPlants:TraesCS3D01G228400.1	EnsemblPlantsGene:TraesCS3D01G228400	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF12	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:310682239..310684451

Molecular Weight (calculated)

69453.8 Da

IEP (calculated)

9.332

GRAVY (calculated)

0.106

Length

628 amino acids

Sequence
(BLAST)

001: MDSAGFSIGM ELSNRDIQIQ MGSQLSEQSS REDLPSLLIQ VPSRTIAGFD CVGRDAVFPA ALSERNNKDT VISIQAPATP PAAAPVRAYD DTQIPYSLSI
101: SMPASPSGLH FSQFRAASVR RNEARAAVAP SDTKQVEAQS PRLLQQTRFH SQPILHASQI NDGTRRADST RDKRFDPFKT FSGRLERQLS NLRGRPLDPM
201: DLGSHHSKIS EETDQVPGTD RYFDALEGPE LDTLRATEVA VLPNDEQWPF LLRFPISAFG MVLGVSSQAI LWKTLATAPP TAFLHVSLAV AHALWYISLA
301: LMGLVSCIYL LKIVFYFEAV RREFHHPIRA NFFFAPWIAC LFLVQGAPRE LAQVHHGVWY MLMAPIFCLE LKIYGQWMSG GQRRLSKVAN PSNHLSIVGN
401: FVGALLGAKM GISEGPIFFF AIGLAHYIVL FVTLYQRLPT NVTLPKELHP VFFLFVAAPS VASMAWAKIN GEFDNGARIA YFIALFLYMS LAVRINFFRG
501: FRFSLAWWAY TFPMTGASIA TITYATEVTN VLTRTLSIGL SGIATVTVAG LLVTTMFHAF VLRDLFPNDV SIAITRRKPK FSKILAHFRS SSSDMKELVL
601: SVSKSPNTDS DSSVTDTDPS VTKGKAEP

Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)

001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS

Arabidopsis Description

SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.