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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026294.1-P Field mustard plastid 99.53 99.37
CDY19015 Canola plastid 99.22 99.22
CDX97407 Canola cytosol 22.76 97.97
CDY14262 Canola plastid 88.38 86.88
CDX92855 Canola plastid 67.5 86.35
CDX84361 Canola plasma membrane 52.75 86.15
CDY29871 Canola plastid 66.88 85.71
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 65.46 83.07
AT4G27970.6 Thale cress plastid 66.25 81.31
Zm00001d010430_P001 Maize plasma membrane 31.08 60.55
GSMUA_Achr5P06840_001 Banana cytosol, endoplasmic reticulum, peroxisome 37.68 59.7
TraesCS1B01G388600.1 Wheat plasma membrane 33.28 56.84
TraesCSU01G204200.1 Wheat plasma membrane 23.55 56.82
GSMUA_Achr9P05400_001 Banana plastid 37.21 53.14
TraesCS1A01G423900.1 Wheat plasma membrane 40.35 50.99
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 38.3 47.94
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 40.5 47.78
TraesCS1B01G455100.1 Wheat plasma membrane 40.19 47.76
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 39.72 47.56
Zm00001d009706_P001 Maize cytosol, peroxisome, plasma membrane 38.15 46.82
KXG22629 Sorghum cytosol, peroxisome, plasma membrane 37.52 46.32
OQU77336 Sorghum cytosol 38.15 46.2
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 43.01 45.82
TraesCS1D01G432800.1 Wheat plasma membrane 41.44 45.52
Zm00001d009705_P001 Maize plasma membrane 40.66 45.36
Os05t0219900-01 Rice cytosol, peroxisome, plasma membrane, plastid 44.11 45.18
CDX87147 Canola cytosol, nucleus, plasma membrane 44.11 45.1
TraesCS3B01G018300.1 Wheat mitochondrion 38.62 44.97
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 37.05 44.87
TraesCS1B01G456400.1 Wheat plasma membrane 42.39 44.85
TraesCSU01G001600.1 Wheat plasma membrane 42.7 44.59
TraesCS1D01G433200.1 Wheat plasma membrane 43.17 44.57
TraesCS1D01G433100.1 Wheat plasma membrane 40.97 44.46
TraesCS3B01G254700.1 Wheat cytosol, peroxisome, plasma membrane 42.86 44.1
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 39.56 44.06
TraesCS1A01G424500.1 Wheat plasma membrane 41.29 44.05
CDX80404 Canola cytosol 43.96 44.03
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 43.33 43.95
TraesCS1B01G456200.1 Wheat plasma membrane 43.33 43.95
TraesCS1B01G456300.1 Wheat plasma membrane 42.7 43.94
TraesCS1B01G456500.1 Wheat plasma membrane 41.44 43.85
Zm00001d011393_P001 Maize cytosol, peroxisome, plasma membrane 43.64 43.85
TraesCS1D01G126500.1 Wheat cytosol, peroxisome, plasma membrane 41.44 43.71
Os01t0385400-01 Rice cytosol, endoplasmic reticulum, plasma membrane 42.7 43.52
TraesCS3D01G228400.1 Wheat cytosol, nucleus, plasma membrane 42.86 43.47
GSMUA_Achr7P14260_001 Banana cytosol 40.66 43.46
Zm00001d044181_P001 Maize plasma membrane 42.86 43.33
TraesCS1D01G432900.1 Wheat plasma membrane 42.23 43.32
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 40.35 43.19
TraesCS3D01G159600.1 Wheat cytosol, peroxisome, plasma membrane 40.82 43.12
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 40.35 42.98
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 40.5 42.79
TraesCS3B01G178600.1 Wheat cytosol, peroxisome, plasma membrane 40.35 42.69
TraesCSU01G001400.1 Wheat plasma membrane, plastid 42.07 42.68
TraesCS3A01G151400.1 Wheat cytosol, peroxisome, plasma membrane 40.35 42.41
Os01t0623200-01 Rice cytosol, peroxisome, plasma membrane 43.8 42.4
Zm00001d039150_P001 Maize plasma membrane 40.03 42.36
Zm00001d041653_P001 Maize plastid 39.87 42.33
Zm00001d037816_P001 Maize plasma membrane 42.23 42.3
EES20021 Sorghum plastid 41.29 42.28
TraesCS1D01G432500.1 Wheat plasma membrane 40.35 41.92
TraesCS1B01G147400.1 Wheat plasma membrane 41.44 41.57
Os07t0181100-01 Rice cytosol, peroxisome, plasma membrane 40.19 41.03
TraesCSU01G001500.1 Wheat plasma membrane 43.33 41.01
KXG22628 Sorghum plastid 41.29 40.97
CDY44267 Canola cytosol 39.4 40.88
CDY46973 Canola cytosol 39.4 40.61
CDX98059 Canola cytosol, peroxisome, plastid 35.32 40.54
TraesCS1A01G127500.1 Wheat plasma membrane 41.44 40.43
TraesCS3A01G225100.1 Wheat plasma membrane 43.17 40.38
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 36.58 40.31
Os01t0226600-02 Rice endoplasmic reticulum, peroxisome, plasma membrane 41.13 39.94
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 40.35 39.91
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 11.93 39.38
CDY30084 Canola plasma membrane 35.32 38.4
CDX88065 Canola cytosol 44.11 37.72
CDY19522 Canola endoplasmic reticulum 11.62 37.19
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 11.62 36.45
Zm00001d039314_P001 Maize plasma membrane 40.19 34.59
OQU87187 Sorghum plasma membrane 43.64 34.53
CDY12936 Canola plasma membrane 19.47 32.55
KXG31512 Sorghum plasma membrane 40.66 32.38
CDY24881 Canola extracellular 9.73 32.29
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 19.31 31.78
CDY03280 Canola plasma membrane 19.31 31.38
CDY08628 Canola golgi, peroxisome, plasma membrane 19.0 31.27
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 3.45 26.83
CDY19523 Canola cytosol, extracellular, plasma membrane 4.24 21.26
CDY12934 Canola cytosol, extracellular, plasma membrane 4.55 21.17
CDY08625 Canola plasma membrane 6.44 20.4
Protein Annotations
Gene3D:1.50.10.150MapMan:19.2.2.5.2MapMan:24.3.10Gene3D:3.10.110.10GO:A0A078DJ43EnsemblPlants:CDX89215
ProteinID:CDX89215ProteinID:CDX89215.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0006810GO:GO:0006873GO:GO:0008150GO:GO:0008308GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0019725GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00149399001InterPro:IPR000608
InterPro:IPR016135InterPro:IPR038665PFAM:PF00179PFAM:PF03595ScanProsite:PS00183PFscan:PS50127
PANTHER:PTHR31269PANTHER:PTHR31269:SF2MetaCyc:PWY-7511InterPro:SLAC/SLAHSMART:SM00212SUPFAM:SSF54495
TMHMM:TMhelixInterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWDUniPathway:UPA00143UniParc:UPI0004EDBEBE
InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg:::
Description
BnaA01g16780D
Coordinates
chrLK031858:+:165722..170793
Molecular Weight (calculated)
71996.9 Da
IEP (calculated)
9.525
GRAVY (calculated)
0.092
Length
637 amino acids
Sequence
(BLAST)
001: MNNTRSASST VSPATPDLLD NHRQSSCGEF SRLEKRMGPR NMTFHSKSMP RGSMFLDQEA FRSSHDKRYD LFRTMSGKLE RQISNLRGKP IDSSLQEEDK
101: EITESLTADR FFEALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTNAE RFLHLTQVVN HVLWWISLVL LLAVSITYLF
201: KTIFFFQAVR REFKHPIRVN FFFAPLISVL FIALGIPHSI TSNLPSMLWY FLMAPVLFLE MKIYGQWMSG GQRRLSKVAN PTNHLAIIGN FAGALLGASM
301: GLEEGPMFFF AVGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTQLC GSFDLGSRFY YFISLFLYFS LVVRINFFRG FKFSLAWWAY
401: TFPMTAVATA TIKYSGEVTG LATQVLSIVM SGAATLMVIG VLVLTVVHAF VKCDLFPNDV AIAISAEQPK QKKWFKQLKN GSFGLKVFEM ASKRILKELK
501: DLQKDPPTSC SAGPVAEDMF HWQATIMGPS DSPYSGGVFL VTIHFPPDYP FKPPKVAFRT KVFHPNINSN GSICLDILKE QWSPALTISK VLLSICSLLT
601: DPNPDDPLVP EIAHMYKTDK NKYESTARTW TQKYGMG
Best Arabidopsis Sequence Match ( AT4G27970.2 )
(BLAST)
001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVVFVFINRV LVS
Arabidopsis Description
SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.