Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G433100.1 | Wheat | plasma membrane | 89.87 | 92.16 |
| TraesCS1A01G424500.1 | Wheat | plasma membrane | 90.86 | 91.62 |
| TraesCS1B01G456300.1 | Wheat | plasma membrane | 81.56 | 79.32 |
| TraesCS1B01G456200.1 | Wheat | plasma membrane | 82.06 | 78.66 |
| HORVU1Hr1G092640.3 | Barley | mitochondrion | 80.73 | 73.86 |
| TraesCS1B01G456400.1 | Wheat | plasma membrane | 72.43 | 72.43 |
| TraesCS1B01G456000.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.94 | 69.72 |
| TraesCS1B01G455100.1 | Wheat | plasma membrane | 61.13 | 68.66 |
| TraesCS1B01G456100.1 | Wheat | cytosol, peroxisome, plasma membrane | 67.28 | 67.73 |
| TraesCS3B01G018300.1 | Wheat | mitochondrion | 61.3 | 67.46 |
| TraesCS1B01G388600.1 | Wheat | plasma membrane | 41.03 | 66.22 |
| Zm00001d009706_P001 | Maize | cytosol, peroxisome, plasma membrane | 55.65 | 64.55 |
| Zm00001d009705_P001 | Maize | plasma membrane | 60.63 | 63.92 |
| KXG22629 | Sorghum | cytosol, peroxisome, plasma membrane | 54.32 | 63.37 |
| Zm00001d039150_P001 | Maize | plasma membrane | 62.13 | 62.13 |
| OQU77336 | Sorghum | cytosol | 53.49 | 61.22 |
| EES20021 | Sorghum | plastid | 62.96 | 60.93 |
| CDX84361 | Canola | plasma membrane | 38.37 | 59.23 |
| KXG22628 | Sorghum | plastid | 61.63 | 57.79 |
| TraesCS3B01G254700.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.31 | 56.7 |
| GSMUA_Achr9P05400_001 | Banana | plastid | 40.7 | 54.93 |
| CDY29871 | Canola | plastid | 44.19 | 53.52 |
| Bra040840.1-P | Field mustard | plastid | 44.19 | 53.52 |
| CDX92855 | Canola | plastid | 44.19 | 53.41 |
| AT4G27970.6 | Thale cress | plastid | 44.68 | 51.83 |
| CDX97408 | Canola | cytosol, peroxisome, plasma membrane, plastid | 43.19 | 51.79 |
| KRH38307 | Soybean | golgi, plasma membrane, plastid | 35.22 | 51.21 |
| PGSC0003DMT400021864 | Potato | cytosol, peroxisome, plastid | 45.51 | 49.37 |
| GSMUA_Achr4P15620_001 | Banana | cytosol, peroxisome, plasma membrane | 41.69 | 49.31 |
| GSMUA_Achr6P31880_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 48.84 | 49.16 |
| Solyc03g007770.2.1 | Tomato | cytosol, nucleus, plasma membrane | 47.18 | 48.71 |
| KRH38311 | Soybean | cytosol, nucleus, plasma membrane | 47.01 | 47.4 |
| KRH08776 | Soybean | cytosol, nucleus, plasma membrane | 47.01 | 47.4 |
| PGSC0003DMT400051388 | Potato | cytosol, nucleus, plasma membrane | 47.84 | 46.75 |
| Bra026471.1-P | Field mustard | cytosol, plastid | 43.02 | 46.5 |
| Solyc09g014610.2.1 | Tomato | plasma membrane | 45.85 | 46.46 |
| PGSC0003DMT400074359 | Potato | plasma membrane | 46.01 | 46.32 |
| Solyc06g036440.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 47.01 | 45.87 |
| VIT_16s0050g01860.t01 | Wine grape | cytosol, nucleus, plasma membrane | 47.67 | 45.77 |
| KRH08775 | Soybean | cytosol, nucleus, plasma membrane | 44.35 | 45.72 |
| TraesCS3B01G178600.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.51 | 45.51 |
| KRH35219 | Soybean | cytosol | 41.86 | 44.92 |
| TraesCS1B01G147400.1 | Wheat | plasma membrane | 47.01 | 44.57 |
| CDX87147 | Canola | cytosol, nucleus, plasma membrane | 44.35 | 42.86 |
| Bra009724.1-P | Field mustard | cytosol | 44.19 | 41.82 |
| CDX80404 | Canola | cytosol | 44.19 | 41.82 |
| CDY19015 | Canola | plastid | 44.19 | 41.76 |
| AT5G24030.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 43.85 | 41.57 |
| Bra026294.1-P | Field mustard | plastid | 44.02 | 41.54 |
| CDX89215 | Canola | plastid | 43.85 | 41.44 |
| Bra029390.1-P | Field mustard | cytosol | 44.02 | 41.41 |
| Bra010388.1-P | Field mustard | plastid | 44.19 | 41.05 |
| CDY14262 | Canola | plastid | 44.02 | 40.9 |
| CDY44267 | Canola | cytosol | 41.69 | 40.88 |
| CDY46973 | Canola | cytosol | 41.36 | 40.29 |
| TraesCS2B01G416100.1 | Wheat | plastid | 37.38 | 38.79 |
| TraesCS3B01G199200.1 | Wheat | plasma membrane | 24.42 | 37.6 |
| CDX88065 | Canola | cytosol | 44.35 | 35.84 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G456500.1 | EnsemblPlantsGene:TraesCS1B01G456500 | Gene3D:1.50.10.150 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR038665 | InterPro:Voltage-dep_anion_channel | InterPro:Voltage-dep_anion_channel_sf |
| PANTHER:PTHR31269 | PANTHER:PTHR31269:SF6 | PFAM:PF03595 | SEG:seg | TIGR:cd09323 | TMHMM:TMhelix |
| MapMan:24.3.10 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:670956629..670958537
Molecular Weight (calculated)
66825.9 Da
IEP (calculated)
7.251
GRAVY (calculated)
0.160
Length
602 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFNGGERER EVVAMATREV SIQMAGVLDG QPGCVLSREP LVVRAAPRAA GASWMEAADT VAADDTMTKD AAAAAHDETR CSVSFSVPGS PSGLHLAQLS
101: MPPLVCACDA DMGIAPVLPT ESKVPWERDR RFDNFKTFYG GLERQLSNLR GVPQDTDVEK GAASKISEED IDEDDEVPTA DRYFAALEGP ELETLRSTEV
201: AVLPKDETWP FLLRFPISAF GMCLGVSSQA MLWKTLESEP STKFLRVHPV VNHVLWWISV ALMVVVSITY LLKIFFYFEA VRREFHHPVR ANFFFAPWIA
301: SLFLAKGMPH PVWEIHHAVL YVLMAPILCL DLKIYGQWMS SDKRRLSKMA NPSNHLAVVG NFVGALLGAR MGLRELPIFF FAVGLAHYVV LFVTLYQRLP
401: TNVQLPKELH PVFFLFVAAP SVASMAWTRI SGEFNDGAKL LYFVSLFLYV SLVVRVNLFR GFRFSLAWWA YTFPMTSVAL ATILYASKVD NMLTRALAVG
501: LSGTAVVTVT GVLATTMYHA FMRKDLFPND VSIAITRRRP KFSKIPTHLQ SSSYDVKELV LSVPNFSSYS KQGAYSDSGS NFRMNISAGE SPMAHGHGRE
601: EC
101: MPPLVCACDA DMGIAPVLPT ESKVPWERDR RFDNFKTFYG GLERQLSNLR GVPQDTDVEK GAASKISEED IDEDDEVPTA DRYFAALEGP ELETLRSTEV
201: AVLPKDETWP FLLRFPISAF GMCLGVSSQA MLWKTLESEP STKFLRVHPV VNHVLWWISV ALMVVVSITY LLKIFFYFEA VRREFHHPVR ANFFFAPWIA
301: SLFLAKGMPH PVWEIHHAVL YVLMAPILCL DLKIYGQWMS SDKRRLSKMA NPSNHLAVVG NFVGALLGAR MGLRELPIFF FAVGLAHYVV LFVTLYQRLP
401: TNVQLPKELH PVFFLFVAAP SVASMAWTRI SGEFNDGAKL LYFVSLFLYV SLVVRVNLFR GFRFSLAWWA YTFPMTSVAL ATILYASKVD NMLTRALAVG
501: LSGTAVVTVT GVLATTMYHA FMRKDLFPND VSIAITRRRP KFSKIPTHLQ SSSYDVKELV LSVPNFSSYS KQGAYSDSGS NFRMNISAGE SPMAHGHGRE
601: EC
001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN
Arabidopsis Description
SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.