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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009706_P001 Maize cytosol, peroxisome, plasma membrane 85.47 84.97
HORVU3Hr1G005540.1 Barley golgi, plasma membrane 50.97 70.32
TraesCS1A01G423900.1 Wheat plasma membrane 61.24 62.7
TraesCSU01G204200.1 Wheat plasma membrane 31.78 62.12
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 61.43 59.59
EES20021 Sorghum plastid 71.32 59.16
TraesCS1D01G432800.1 Wheat plasma membrane 64.53 57.41
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 60.08 57.41
TraesCSU01G001600.1 Wheat plasma membrane 67.83 57.38
TraesCS1B01G455100.1 Wheat plasma membrane 59.5 57.28
TraesCS3B01G018300.1 Wheat mitochondrion 60.47 57.04
KXG22628 Sorghum plastid 70.93 57.01
TraesCS1D01G433200.1 Wheat plasma membrane 68.02 56.89
TraesCS1B01G456300.1 Wheat plasma membrane 67.44 56.22
TraesCS1D01G432900.1 Wheat plasma membrane 67.05 55.72
TraesCS1A01G424500.1 Wheat plasma membrane 64.34 55.61
OQU77336 Sorghum cytosol 56.59 55.51
GSMUA_Achr9P05400_001 Banana plastid 47.87 55.38
TraesCS1D01G433100.1 Wheat plasma membrane 62.79 55.2
TraesCS1B01G456200.1 Wheat plasma membrane 67.05 55.1
TraesCS1B01G456400.1 Wheat plasma membrane 64.15 54.98
CDX84361 Canola plasma membrane 41.28 54.62
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 62.98 54.35
TraesCS1B01G456500.1 Wheat plasma membrane 63.37 54.32
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 63.37 54.23
TraesCSU01G001400.1 Wheat plasma membrane, plastid 65.7 53.98
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 61.63 53.45
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 58.72 52.97
HORVU1Hr1G092640.3 Barley mitochondrion 66.67 52.28
HORVU1Hr1G092740.1 Barley mitochondrion, peroxisome, plasma membrane 61.24 52.23
TraesCSU01G001500.1 Wheat plasma membrane 66.67 51.11
TraesCS1D01G432500.1 Wheat plasma membrane 59.5 50.08
KRH38307 Soybean golgi, plasma membrane, plastid 39.73 49.52
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 55.43 49.48
CDY29871 Canola plastid 47.09 48.89
Bra040840.1-P Field mustard plastid 47.09 48.89
CDX92855 Canola plastid 47.09 48.8
HORVU1Hr1G092660.2 Barley plastid 61.43 48.18
AT4G27970.6 Thale cress plastid 47.29 47.01
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 46.32 46.95
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 45.54 46.81
PGSC0003DMT400021864 Potato cytosol, peroxisome, plastid 50.0 46.49
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 52.91 45.65
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 45.93 45.06
Solyc03g007770.2.1 Tomato cytosol, nucleus, plasma membrane 50.78 44.94
Solyc09g014610.2.1 Tomato plasma membrane 50.78 44.11
KRH38311 Soybean cytosol, nucleus, plasma membrane 50.58 43.72
KRH08776 Soybean cytosol, nucleus, plasma membrane 50.58 43.72
PGSC0003DMT400074359 Potato plasma membrane 50.58 43.65
Solyc06g036440.1.1 Tomato cytosol, peroxisome, plasma membrane 51.74 43.27
Bra026471.1-P Field mustard cytosol, plastid 46.51 43.09
VIT_16s0050g01860.t01 Wine grape cytosol, nucleus, plasma membrane 52.13 42.9
PGSC0003DMT400051388 Potato cytosol, nucleus, plasma membrane 50.78 42.53
KRH35219 Soybean cytosol 45.93 42.25
KRH08775 Soybean cytosol, nucleus, plasma membrane 47.29 41.78
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 49.81 40.92
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 50.78 40.68
OQU87187 Sorghum plasma membrane 61.63 39.5
CDX87147 Canola cytosol, nucleus, plasma membrane 47.67 39.49
CDX80404 Canola cytosol 48.06 38.99
Bra029390.1-P Field mustard cytosol 48.26 38.91
AT5G24030.1 Thale cress cytosol, endoplasmic reticulum, nucleus 47.87 38.9
Bra009724.1-P Field mustard cytosol 47.87 38.84
CDY19015 Canola plastid 46.51 37.68
CDY44267 Canola cytosol 44.77 37.62
CDY46973 Canola cytosol 44.96 37.54
CDX89215 Canola plastid 46.32 37.52
Bra026294.1-P Field mustard plastid 46.32 37.46
Bra010388.1-P Field mustard plastid 46.51 37.04
CDY14262 Canola plastid 46.32 36.88
OQU82188 Sorghum plastid 42.64 33.69
CDX88065 Canola cytosol 47.87 33.15
EER99979 Sorghum plastid 26.94 33.1
KXG31512 Sorghum plasma membrane 50.78 32.75
Protein Annotations
EnsemblPlants:KXG22629EnsemblPlantsGene:SORBI_3009G248700Gene3D:1.50.10.150GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR038665InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269PANTHER:PTHR31269:SF6PFAM:PF03595ProteinID:KXG22629ProteinID:KXG22629.1SEG:seg
TMHMM:TMhelixUniParc:UPI00081ACA6EUniProt:A0A1B6PA33MapMan:24.3.10::
Description
hypothetical protein
Coordinates
chr9:+:58415605..58417155
Molecular Weight (calculated)
56943.4 Da
IEP (calculated)
8.964
GRAVY (calculated)
0.092
Length
516 amino acids
Sequence
(BLAST)
001: MTTEEVKQAR HRPQPTLTIR SEEPPRRQQQ QSQGTLAHSD STTGERDRRF DQFKTLGGRL ERQLSSIRGG SQHPAAAVAD DDDEANRDSE AETDDDSGEV
101: PTADRYFAAL EGPELETLRA TEVPVLPSDE TWPFLLRFPI SAFGMCMGVS SQAMLWKTLE QEPSTAFLGV SPSVNDVLWC VSAALMALVS FIYLLKAVFY
201: FEAVRREFHH PIRVNFFFAP WIACLFLAKG LPEPVTTLHH AVWYQLMAPI LILDLKMYGQ WMSGGEWRLS RVASPTSHLA VVGNFVGALL GARMGLREPA
301: LFFFAVGSVH YVVLFVTLYQ RLPTNVPLPR DLHPVFFLFV ATPSVASVAW ARISGEFGLG ARLAYYVSLF LYASLVARVS FFFRGVRFSL AWWAYTFPVT
401: SAAIATAVYA SAMTSALTQA LSVGLSAVAS VTVAGVLATT VYRAFVRRDL FPNDVSIAIR RRPKAKFGNI LKRIRTSSAD LKDLVVSRHG GGSASETSSV
501: SEPPTPMVYG RGRAEP
Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)
001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN
Arabidopsis Description
SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.