Factsheet for TraesCS1A01G424400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G204200.1	Wheat	plasma membrane	45.8	99.24
HORVU1Hr1G092740.1	Barley	mitochondrion, peroxisome, plasma membrane	85.84	81.16
TraesCS1A01G423900.1	Wheat	plasma membrane	64.86	73.61
TraesCS3A01G028100.1	Wheat	cytosol, peroxisome, plasma membrane	63.99	68.8
TraesCS1A01G424500.1	Wheat	plasma membrane	70.98	68.01
TraesCS1A01G423000.1	Wheat	cytosol, peroxisome, plasma membrane	63.29	67.04
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	54.9	60.5
Zm00001d009705_P001	Maize	plasma membrane	60.31	60.42
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	52.97	58.72
OQU77336	Sorghum	cytosol	53.32	57.98
Zm00001d039150_P001	Maize	plasma membrane	60.49	57.48
EES20021	Sorghum	plastid	61.89	56.91
CDX84361	Canola	plasma membrane	37.76	55.38
KXG22628	Sorghum	plastid	60.14	53.58
GSMUA_Achr9P05400_001	Banana	plastid	40.91	52.47
Bra040840.1-P	Field mustard	plastid	44.41	51.11
CDY29871	Canola	plastid	44.41	51.11
CDX92855	Canola	plastid	44.06	50.6
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	43.18	49.2
AT4G27970.6	Thale cress	plastid	44.58	49.13
KRH38307	Soybean	golgi, plasma membrane, plastid	34.79	48.07
TraesCS3A01G225100.1	Wheat	plasma membrane	56.47	47.43
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	45.98	47.39
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	49.3	47.16
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	41.43	46.56
Bra026471.1-P	Field mustard	cytosol, plastid	43.18	44.34
KRH08776	Soybean	cytosol, nucleus, plasma membrane	46.15	44.22
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	48.25	44.02
KRH38311	Soybean	cytosol, nucleus, plasma membrane	45.8	43.89
Solyc09g014610.2.1	Tomato	plasma membrane	45.45	43.77
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	46.15	43.56
PGSC0003DMT400074359	Potato	plasma membrane	45.28	43.31
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	44.06	43.22
KRH08775	Soybean	cytosol, nucleus, plasma membrane	43.71	42.81
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	45.63	42.3
KRH35219	Soybean	cytosol	41.26	42.07
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	44.06	40.91
TraesCS1A01G127500.1	Wheat	plasma membrane	46.33	40.58
CDX87147	Canola	cytosol, nucleus, plasma membrane	43.88	40.29
Bra009724.1-P	Field mustard	cytosol	44.58	40.09
CDX80404	Canola	cytosol	44.41	39.94
CDY19015	Canola	plastid	44.41	39.87
CDX89215	Canola	plastid	44.06	39.56
Bra026294.1-P	Field mustard	plastid	44.06	39.5
Bra029390.1-P	Field mustard	cytosol	44.06	39.38
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	39.51	39.3
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	43.53	39.21
Bra010388.1-P	Field mustard	plastid	43.71	38.58
CDY14262	Canola	plastid	43.53	38.43
CDY46973	Canola	cytosol	40.73	37.7
CDY44267	Canola	cytosol	40.21	37.46
TraesCS3A01G167000.1	Wheat	plasma membrane	24.3	34.49
CDX88065	Canola	cytosol	44.76	34.36

Protein Annotations

EnsemblPlants:TraesCS1A01G424400.1	EnsemblPlantsGene:TraesCS1A01G424400	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF6	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:579533509..579535313

Molecular Weight (calculated)

63239.2 Da

IEP (calculated)

7.481

GRAVY (calculated)

0.132

Length

572 amino acids

Sequence
(BLAST)

001: MAGLPGTGAG GHHAVPTGGA AVAVHGEPTL GDTPLSVSFS VPSSPSGIHL AQGRLRMPPS AHASIAEVHA TPVLPSESEQ VEGRHLVVPQ LVKHAQHHSQ
101: SSLVIQSAGE GPRSNSTREL DRQFDQFRTF SGRHNRQLSN LRGLPQDPPG TDVEHGAVSK LFEEDTNEDD DVPTADRYFA ALEGPEFDTL RSTEVAVLPK
201: DEPWPFLLRF PISAFGMCLG VSSQAMLWKT LQSEPSTAFL RVHPAVSHVL WWISLALTVI VSITYLLKVV FYFEAVRREF HHPVRVNTLL KGVPHPVWEI
301: HHVVWYLLMA PIFWLDIKIY GQWMSSGERR LSKVANPSNH LAIVGNFVGA LLGARMGLRE LPIFFFAVGF AHYVVLFVTL YQRLPTNMQL PKDLHPVFFL
401: FVAAPSVASM AWTRISGEFN DGAKLLYYVS LFLYVSLVVR VNLFWGFRFS LAWWAYTFPM TSVALATVLY ASEVDNLVTR AMALGLSGIA TMTIIVVLAA
501: TMYHAFVRGD LFPNDVSITI TKQRLKFSKI LAHLQTCGSD VKELVVSIPN FNSNSKQGAY SDDSDSNARM NN

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.