Factsheet for TraesCS1A01G424500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G433100.1	Wheat	plasma membrane	90.95	92.5
TraesCS1B01G456500.1	Wheat	plasma membrane	91.62	90.86
TraesCS1A01G423900.1	Wheat	plasma membrane	63.15	74.8
HORVU1Hr1G092640.3	Barley	mitochondrion	80.9	73.4
TraesCS1A01G424400.1	Wheat	plasma membrane, plastid	68.01	70.98
TraesCS3A01G028100.1	Wheat	cytosol, peroxisome, plasma membrane	62.81	70.49
TraesCS1A01G423000.1	Wheat	cytosol, peroxisome, plasma membrane	63.65	70.37
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	56.95	65.51
Zm00001d009705_P001	Maize	plasma membrane	62.14	64.97
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	55.61	64.34
Zm00001d039150_P001	Maize	plasma membrane	63.48	62.96
OQU77336	Sorghum	cytosol	54.77	62.17
EES20021	Sorghum	plastid	64.66	62.06
CDX84361	Canola	plasma membrane	38.69	59.23
KXG22628	Sorghum	plastid	63.15	58.72
GSMUA_Achr9P05400_001	Banana	plastid	41.54	55.61
Bra040840.1-P	Field mustard	plastid	44.56	53.52
CDY29871	Canola	plastid	44.56	53.52
CDX92855	Canola	plastid	44.56	53.41
TraesCS3A01G225100.1	Wheat	plasma membrane	59.3	51.98
AT4G27970.6	Thale cress	plastid	45.06	51.83
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	43.55	51.79
KRH38307	Soybean	golgi, plasma membrane, plastid	35.68	51.45
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	42.38	49.71
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	49.08	49.0
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	47.74	48.89
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	45.39	48.83
KRH08776	Soybean	cytosol, nucleus, plasma membrane	47.57	47.57
KRH38311	Soybean	cytosol, nucleus, plasma membrane	47.57	47.57
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	48.41	46.92
Bra026471.1-P	Field mustard	cytosol, plastid	43.38	46.5
KRH08775	Soybean	cytosol, nucleus, plasma membrane	45.06	46.06
PGSC0003DMT400074359	Potato	plasma membrane	45.73	45.65
Solyc09g014610.2.1	Tomato	plasma membrane	45.23	45.45
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	47.74	45.45
KRH35219	Soybean	cytosol	42.71	45.45
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	46.73	45.22
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	45.39	44.72
TraesCS1A01G127500.1	Wheat	plasma membrane	47.4	43.34
CDX87147	Canola	cytosol, nucleus, plasma membrane	44.56	42.7
Bra009724.1-P	Field mustard	cytosol	44.39	41.67
CDX80404	Canola	cytosol	44.39	41.67
CDY19015	Canola	plastid	44.39	41.6
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	44.22	41.57
Bra029390.1-P	Field mustard	cytosol	44.56	41.56
Bra026294.1-P	Field mustard	plastid	44.39	41.54
CDX89215	Canola	plastid	44.05	41.29
Bra010388.1-P	Field mustard	plastid	44.72	41.2
CDY14262	Canola	plastid	44.56	41.05
CDY44267	Canola	cytosol	42.21	41.04
CDY46973	Canola	cytosol	41.88	40.45
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	37.52	38.96
TraesCS3A01G167000.1	Wheat	plasma membrane	24.12	35.73
CDX88065	Canola	cytosol	44.56	35.7

Protein Annotations

EnsemblPlants:TraesCS1A01G424500.1	EnsemblPlantsGene:TraesCS1A01G424500	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF6	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:579573900..579576192

Molecular Weight (calculated)

65879.9 Da

IEP (calculated)

8.092

GRAVY (calculated)

0.196

Length

597 amino acids

Sequence
(BLAST)

001: MATREVSIQM AGVLDGQPGC ALSRESLVVR AVPRTAGASL MEAADAVAAA DKMTKDAAGA AQDETRCSVS FSVPGSPSGL HLAQLSMPPL VCAGDADVGT
101: APVLPTESKV PWERDRRFDH FKTFYGGLER QLSNLRGVPQ DTDVEKGAAS KISEEDIDKD DEMPTADRYF AALEGPELET LRSTEVAVLP KDETWPFLLR
201: FPISAFGMCL GVSSQAMLWK TLESEPSTKF LHVHPVVNHV LWWISVALMV VVSITYLLKI VFYFEAVRRE FHQPVRANFF FAPWIACLFL VKGVPHPVWE
301: IHHAVWYVLM APILCLDLKI YGQWMSSDER RLSKVANPSN RLAVVGNFVG ALLGARMGLR ELPIFFFVVG LAHYVVLFVT LYQRLPTNVQ LPKELHPVFF
401: LFVAAPSVAS MAWTRISGEF NDGAKLLYFV SLFLYMSLVA RVNLFRGFRF SLAWWAYTFP MTSVALATAL YASKVDNVLT RALAVGLSGT AVVTVTGVLA
501: ATMYHAFVRK DLFPNDVSIA ITRRRPKFSK ILAHLRPSSY DVKELVLSVP NFSSYSRQGA YSDSGANSRM NISAGETPMA HGHGREECET VGAKHVA

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.