Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026471.1-P | Field mustard | cytosol, plastid | 77.8 | 88.69 |
| CDX87147 | Canola | cytosol, nucleus, plasma membrane | 85.98 | 87.64 |
| Bra009724.1-P | Field mustard | cytosol | 84.72 | 84.59 |
| CDX80404 | Canola | cytosol | 84.72 | 84.59 |
| CDY44267 | Canola | cytosol | 74.17 | 76.71 |
| Bra029390.1-P | Field mustard | cytosol | 77.17 | 76.56 |
| CDY46973 | Canola | cytosol | 74.02 | 76.05 |
| CDX88065 | Canola | cytosol | 84.41 | 71.95 |
| HORVU5Hr1G055480.1 | Barley | golgi | 29.76 | 71.05 |
| Zm00001d010430_P001 | Maize | plasma membrane | 35.28 | 68.5 |
| GSMUA_Achr5P06840_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 39.84 | 62.94 |
| KRH38307 | Soybean | golgi, plasma membrane, plastid | 40.31 | 61.84 |
| PGSC0003DMT400021864 | Potato | cytosol, peroxisome, plastid | 51.65 | 59.1 |
| TraesCS1B01G388600.1 | Wheat | plasma membrane | 34.49 | 58.71 |
| KRH08776 | Soybean | cytosol, nucleus, plasma membrane | 54.96 | 58.46 |
| PGSC0003DMT400074359 | Potato | plasma membrane | 54.8 | 58.19 |
| KRH38311 | Soybean | cytosol, nucleus, plasma membrane | 54.65 | 58.12 |
| GSMUA_Achr9P05400_001 | Banana | plastid | 40.47 | 57.62 |
| TraesCSU01G204200.1 | Wheat | plasma membrane | 23.78 | 57.2 |
| AT4G27970.6 | Thale cress | plastid | 46.14 | 56.45 |
| Solyc06g036440.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 54.49 | 56.08 |
| Solyc03g007770.2.1 | Tomato | cytosol, nucleus, plasma membrane | 51.02 | 55.57 |
| VIT_16s0050g01860.t01 | Wine grape | cytosol, nucleus, plasma membrane | 54.65 | 55.34 |
| Solyc09g014610.2.1 | Tomato | plasma membrane | 51.5 | 55.05 |
| KRH08775 | Soybean | cytosol, nucleus, plasma membrane | 49.76 | 54.11 |
| PGSC0003DMT400051388 | Potato | cytosol, nucleus, plasma membrane | 51.97 | 53.57 |
| GSMUA_Achr4P15620_001 | Banana | cytosol, peroxisome, plasma membrane | 41.42 | 51.67 |
| TraesCS1D01G126500.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.66 | 51.16 |
| GSMUA_Achr6P31880_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 48.03 | 51.0 |
| TraesCS3B01G178600.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.56 | 50.17 |
| GSMUA_Achr7P14260_001 | Banana | cytosol | 46.77 | 49.83 |
| TraesCS1A01G423900.1 | Wheat | plasma membrane | 39.53 | 49.8 |
| Os01t0385400-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 48.66 | 49.44 |
| TraesCS3D01G159600.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.93 | 49.42 |
| Os05t0219900-01 | Rice | cytosol, peroxisome, plasma membrane, plastid | 48.35 | 49.36 |
| TraesCS1B01G147400.1 | Wheat | plasma membrane | 48.98 | 48.98 |
| TraesCS3A01G151400.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.46 | 48.68 |
| OQU77636 | Sorghum | cytosol, peroxisome, plasma membrane | 48.03 | 48.57 |
| TraesCS1A01G423000.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.1 | 48.33 |
| TraesCS1B01G455100.1 | Wheat | plasma membrane | 40.79 | 48.32 |
| TraesCS3B01G254700.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.93 | 48.14 |
| Zm00001d037816_P001 | Maize | plasma membrane | 48.19 | 48.11 |
| KXG22629 | Sorghum | cytosol, peroxisome, plasma membrane | 38.9 | 47.87 |
| TraesCS3A01G028100.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.84 | 47.56 |
| TraesCS3D01G228400.1 | Wheat | cytosol, nucleus, plasma membrane | 46.93 | 47.45 |
| TraesCS1A01G127500.1 | Wheat | plasma membrane | 48.66 | 47.32 |
| Zm00001d009706_P001 | Maize | cytosol, peroxisome, plasma membrane | 38.58 | 47.21 |
| TraesCS1D01G432800.1 | Wheat | plasma membrane | 42.99 | 47.07 |
| KXG28459 | Sorghum | cytosol, peroxisome, plasma membrane | 38.9 | 46.96 |
| Zm00001d044181_P001 | Maize | plasma membrane | 46.46 | 46.83 |
| Zm00001d041653_P001 | Maize | plastid | 44.09 | 46.67 |
| Zm00001d011393_P001 | Maize | cytosol, peroxisome, plasma membrane | 46.14 | 46.21 |
| Os01t0623200-01 | Rice | cytosol, peroxisome, plasma membrane | 47.72 | 46.05 |
| OQU77336 | Sorghum | cytosol | 38.11 | 46.01 |
| TraesCS3B01G018300.1 | Wheat | mitochondrion | 39.37 | 45.7 |
| TraesCSU01G001600.1 | Wheat | plasma membrane | 43.46 | 45.25 |
| TraesCS1B01G456100.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.52 | 45.15 |
| TraesCS1D01G433200.1 | Wheat | plasma membrane | 43.78 | 45.06 |
| TraesCS1D01G433100.1 | Wheat | plasma membrane | 41.57 | 44.97 |
| TraesCS1D01G432700.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.68 | 44.94 |
| TraesCS1B01G456200.1 | Wheat | plasma membrane | 44.41 | 44.9 |
| TraesCSU01G001400.1 | Wheat | plasma membrane, plastid | 44.41 | 44.9 |
| Zm00001d009705_P001 | Maize | plasma membrane | 40.16 | 44.66 |
| TraesCS1D01G432900.1 | Wheat | plasma membrane | 43.62 | 44.61 |
| TraesCS1A01G424500.1 | Wheat | plasma membrane | 41.57 | 44.22 |
| TraesCS1B01G456400.1 | Wheat | plasma membrane | 41.89 | 44.19 |
| TraesCS1B01G456300.1 | Wheat | plasma membrane | 42.83 | 43.94 |
| TraesCS3A01G225100.1 | Wheat | plasma membrane | 47.09 | 43.91 |
| Os01t0226600-02 | Rice | endoplasmic reticulum, peroxisome, plasma membrane | 45.35 | 43.9 |
| TraesCS1B01G456500.1 | Wheat | plasma membrane | 41.57 | 43.85 |
| Os07t0181100-01 | Rice | cytosol, peroxisome, plasma membrane | 42.83 | 43.59 |
| TraesCS1A01G424400.1 | Wheat | plasma membrane, plastid | 39.21 | 43.53 |
| TraesCS3D01G017800.1 | Wheat | mitochondrion, plasma membrane | 40.79 | 43.53 |
| EES20021 | Sorghum | plastid | 42.36 | 43.25 |
| KXG24404 | Sorghum | cytosol, peroxisome, plasma membrane | 43.78 | 43.17 |
| Zm00001d039150_P001 | Maize | plasma membrane | 40.31 | 42.52 |
| TraesCS1D01G432500.1 | Wheat | plasma membrane | 40.94 | 42.41 |
| TraesCSU01G001500.1 | Wheat | plasma membrane | 44.41 | 41.9 |
| TraesCS1B01G456000.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.32 | 41.0 |
| KXG22628 | Sorghum | plastid | 41.42 | 40.97 |
| AT1G12480.1 | Thale cress | cytosol, nucleus, plasma membrane | 35.75 | 40.83 |
| Zm00001d039314_P001 | Maize | plasma membrane | 46.93 | 40.27 |
| KXG31512 | Sorghum | plasma membrane | 46.77 | 37.12 |
| OQU87187 | Sorghum | plasma membrane | 46.3 | 36.52 |
| AT1G62262.1 | Thale cress | plasma membrane | 18.58 | 32.33 |
| AT1G62280.1 | Thale cress | plasma membrane | 18.58 | 30.65 |
Protein Annotations
| Gene3D:1.50.10.150 | MapMan:24.3.10 | EntrezGene:832468 | UniProt:A0A178USC2 | ProteinID:AED93247.1 | ProteinID:ANM71081.1 |
| ArrayExpress:AT5G24030 | EnsemblPlantsGene:AT5G24030 | RefSeq:AT5G24030 | TAIR:AT5G24030 | RefSeq:AT5G24030-TAIR-G | EnsemblPlants:AT5G24030.1 |
| TAIR:AT5G24030.1 | Unigene:At.6575 | ProteinID:BAB08726.1 | EMBL:BT015364 | EMBL:BT015721 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006821 | GO:GO:0006873 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008308 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | GO:GO:0015698 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0055085 | GO:GO:0098656 | InterPro:IPR038665 |
| RefSeq:NP_001332637.1 | RefSeq:NP_197791.1 | ProteinID:OAO96380.1 | PFAM:PF03595 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31269 |
| PANTHER:PTHR31269:SF21 | UniProt:Q9FLV9 | InterPro:SLAC/SLAH | Symbol:SLAH3 | TMHMM:TMhelix | UniParc:UPI000009D3BD |
| InterPro:Voltage-dep_anion_channel | InterPro:Voltage-dep_anion_channel_sf | SEG:seg | : | : | : |
Description
SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
Coordinates
chr5:-:8118317..8122914
Molecular Weight (calculated)
72342.7 Da
IEP (calculated)
8.523
GRAVY (calculated)
-0.188
Length
635 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.