Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019770.1-P | Field mustard | cytosol, peroxisome, plastid | 89.21 | 89.37 |
| CDX98059 | Canola | cytosol, peroxisome, plastid | 89.21 | 89.37 |
| CDY30084 | Canola | plasma membrane | 89.03 | 84.47 |
| VIT_02s0025g04930.t01 | Wine grape | cytosol, nucleus, plasma membrane, plastid | 70.5 | 74.81 |
| HORVU2Hr1G094480.1 | Barley | endoplasmic reticulum, extracellular | 12.23 | 72.34 |
| Solyc08g079770.2.1 | Tomato | cytosol, peroxisome, plastid | 64.21 | 64.32 |
| GSMUA_Achr8P12070_001 | Banana | cytosol | 57.55 | 64.13 |
| PGSC0003DMT400009999 | Potato | cytosol | 64.21 | 63.75 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus, plastid | 63.13 | 60.21 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 58.27 | 60.0 |
| GSMUA_Achr5P20180_001 | Banana | cytosol | 59.89 | 58.63 |
| TraesCS2A01G398000.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 60.43 | 58.43 |
| TraesCS2B01G416100.1 | Wheat | plastid | 60.43 | 57.93 |
| TraesCS2D01G395700.1 | Wheat | plastid | 60.43 | 57.44 |
| OQU82188 | Sorghum | plastid | 60.79 | 51.76 |
| AT4G27970.6 | Thale cress | plastid | 40.29 | 43.16 |
| AT5G24030.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 40.83 | 35.75 |
| AT1G62262.1 | Thale cress | plasma membrane | 23.02 | 35.07 |
| AT1G62280.1 | Thale cress | plasma membrane | 23.2 | 33.51 |
| Zm00001d002603_P001 | Maize | nucleus | 60.97 | 31.98 |
Protein Annotations
| Gene3D:1.50.10.150 | MapMan:24.3.10 | EntrezGene:837805 | UniProt:A0A178WLC1 | ProteinID:AAF79652.1 | ProteinID:AAF88102.1 |
| ProteinID:AEE28888.1 | EMBL:AF424557 | ArrayExpress:AT1G12480 | EnsemblPlantsGene:AT1G12480 | RefSeq:AT1G12480 | TAIR:AT1G12480 |
| RefSeq:AT1G12480-TAIR-G | EnsemblPlants:AT1G12480.1 | TAIR:AT1G12480.1 | Unigene:At.71145 | EMBL:BT002640 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006820 | GO:GO:0006873 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008308 | GO:GO:0008509 | GO:GO:0009270 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0010037 |
| GO:GO:0010118 | GO:GO:0010193 | GO:GO:0015698 | GO:GO:0015711 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019725 | GO:GO:0019901 | GO:GO:0019903 | GO:GO:0050891 | GO:GO:0055085 | GO:GO:0090332 |
| GO:GO:0098656 | GO:GO:1902456 | InterPro:IPR038665 | RefSeq:NP_563909.1 | ProteinID:OAP18701.1 | Symbol:OZS1 |
| PFAM:PF03595 | PO:PO:0000013 | PO:PO:0000036 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009032 | PO:PO:0009047 | PANTHER:PTHR31269 | PANTHER:PTHR31269:SF11 | UniProt:Q9LD83 | InterPro:SLAC/SLAH |
| TMHMM:TMhelix | UniParc:UPI00000AC66C | InterPro:Voltage-dep_anion_channel | InterPro:Voltage-dep_anion_channel_sf | SEG:seg | : |
Description
SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
Coordinates
chr1:-:4257268..4259300
Molecular Weight (calculated)
63238.2 Da
IEP (calculated)
9.589
GRAVY (calculated)
-0.051
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.