Factsheet for GSMUA_Achr5P20180_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G094480.1	Barley	endoplasmic reticulum, extracellular	13.2	79.79
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	79.75	77.7
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	69.89	73.52
GSMUA_Achr8P12070_001	Banana	cytosol	64.08	72.95
VIT_02s0025g04930.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	61.09	66.22
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	66.2	65.39
TraesCS2B01G416100.1	Wheat	plastid	66.02	64.66
TraesCS2D01G395700.1	Wheat	plastid	66.55	64.62
PGSC0003DMT400009999	Potato	cytosol	60.39	61.25
Solyc08g079770.2.1	Tomato	cytosol, peroxisome, plastid	59.51	60.9
Bra019770.1-P	Field mustard	cytosol, peroxisome, plastid	58.63	60.0
AT1G12480.1	Thale cress	cytosol, nucleus, plasma membrane	58.63	59.89
CDX98059	Canola	cytosol, peroxisome, plastid	58.45	59.82
OQU82188	Sorghum	plastid	66.37	57.73
CDY30084	Canola	plasma membrane	58.98	57.17
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	35.39	50.0
GSMUA_Achr9P05400_001	Banana	plastid	37.85	48.21
GSMUA_Achr2P06370_001	Banana	nucleus	8.27	40.87
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	36.27	40.47
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	42.25	40.13
GSMUA_Achr6P07610_001	Banana	golgi, mitochondrion, plasma membrane, plastid	23.06	38.76
GSMUA_Achr7P14260_001	Banana	cytosol	39.79	37.92
GSMUA_Achr10P...	Banana	endoplasmic reticulum	23.59	37.12
GSMUA_Achr9P21990_001	Banana	plasma membrane	24.3	36.51
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	24.65	36.46
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	23.59	35.17
Zm00001d002603_P001	Maize	nucleus	64.96	34.81

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0006810	GO:GO:0006873	GO:GO:0008150	GO:GO:0008308	GO:GO:0009987	GO:GO:0015698
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0055085	GO:GO:0098656	EnsemblPlantsGene:GSMUA_Achr5G20180_001
EnsemblPlants:GSMUA_Achr5P20180_001	EnsemblPlants:GSMUA_Achr5T20180_001	InterPro:IPR038665	UniProt:M0T047	PFAM:PF03595	PANTHER:PTHR31269
PANTHER:PTHR31269:SF11	InterPro:SLAC/SLAH	TMHMM:TMhelix	UniParc:UPI000296ADF3	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
SEG:seg	:	:	:	:	:

Description

C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G20180_001]

Coordinates

chr5:+:21915382..21917409

Molecular Weight (calculated)

62663.5 Da

IEP (calculated)

9.680

GRAVY (calculated)

0.072

Length

568 amino acids

Sequence
(BLAST)

001: MASTPSSPKE HHFVDIHPVL SDDNDNLNRL RDRQSSDATV NFRAGGDGEG TEKRLQRNVW TFSRQIPLES GIGVFDVEKK GSVEGESSGN ARGKSLGGVG
101: ATGGDAGNRK GYFDMFRTKS ALGAKQNSSI PSWKENEPDP DNAEGVAGSA GADGVNKSVP AGRYFAALRG PELDQVREYE DILLPKDEVW PFLLRFPVGC
201: FGICLGLGSQ AILWGALSSS PAMAFLRVSP IINLALWLLA LAILVSVSVA YTLKCVFYFE AIRREYFHPV RVNFFFAPWI ACMFLAIGVP PRWAPRHLHP
301: AIWCAFIAPL FVLELKVYGQ WLSGGKRRLC KVANPSSHLS VVGNFVGAIL AAKVGWGEAG KFLWAIGLAH YLCLFVTLYQ RLTTSQALPK ELHPVYSMFI
401: ATPSAASIGW HAIYGEFDAV SRTFYFIALF LYCSLVVRIN FFRGFKFSVA WWSYTFPMTT ASLAAIRYAE EVTCFFSKGL ALSLSLMSTA IVSLMLVSTL
501: LHAFVWRSLF PNDLAIAITK DRSDGAKTQD KEKKASKKNY DLKRWAKQSS LSLVSSIRRG HSGDKDLK

Best Arabidopsis Sequence Match ( AT1G12480.1 )
(BLAST)

001: MERKQSNAHS TFADINEVED EAEQELQQQE NNNNKRFSGN RGPNRGKQRP FRGFSRQVSL ETGFSVLNRE SRERDDKKSL PRSGRSFGGF ESGGIINGGD
101: GRKTDFSMFR TKSTLSKQKS LLPSIIRERD IENSLRTEDG ETKDDSINEN VSAGRYFAAL RGPELDEVKD NEDILLPKEE QWPFLLRFPI GCFGICLGLS
201: SQAVLWLALA KSPATNFLHI TPLINLVVWL FSLVVLVSVS FTYILKCIFY FEAVKREYFH PVRVNFFFAP WVVCMFLAIS VPPMFSPNRK YLHPAIWCVF
301: MGPYFFLELK IYGQWLSGGK RRLCKVANPS SHLSVVGNFV GAILASKVGW DEVAKFLWAV GFAHYLVVFV TLYQRLPTSE ALPKELHPVY SMFIAAPSAA
401: SIAWNTIYGQ FDGCSRTCFF IALFLYISLV ARINFFTGFK FSVAWWSYTF PMTTASVATI KYAEAVPGYP SRALALTLSF ISTAMVCVLF VSTLLHAFVW
501: QTLFPNDLAI AITKRKLTRE KKPFKRAYDL KRWTKQALAK KISAEKDFEA EEESHH

Arabidopsis Description

SLAC1SLAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WLC1]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.